Triticum urartu (red wild einkorn wheat): 125540470
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Entry
125540470 CDS
T08232
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03020
RNA polymerase
tua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125540470
09124 Replication and repair
03420 Nucleotide excision repair
125540470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125540470
03400 DNA repair and recombination proteins [BR:
tua03400
]
125540470
Enzymes [BR:
tua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125540470
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
125540470
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
125540470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
TACC_C
Motif
Other DBs
NCBI-GeneID:
125540470
NCBI-ProteinID:
XP_048560044
UniProt:
A0A8R7TPX9
LinkDB
All DBs
Position
2:748822489..748830848
Genome browser
AA seq
1858 aa
AA seq
DB search
MDARFPHSPAEVAKVKLVQFGVLSPDEIRQMSVVMIEHAETTERGKVKSGGLSDPRLGTI
DRKLKCDTCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSVMRCVCFNCSKILADEEDTK
FQQALKIKNPKNRLRRIYDACKSKKVCSGGEDLEGQDQQDTEEPVKKKGGCGAQQPNITV
DGMKMVAEFKTTKKKNDEQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPEFAR
PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIT
EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
EDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
LLGCRKMTKRDTLIEKDVFMNILMWWEDFDGKISAPTILKPRPIWTGKQVFNLIIPKLIN
LIRFSAWHAETENGFTTPGDTVVRIEKGELLSGTLCKKTLGASSGSLIHVIWEEVGPDAA
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADADTMEKINETIANAKIEVNGLIKQAQEKEL
EPEPGRTMMESFENRVNQVLNKARDESGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
LDSLKMKKDEFDNVFRYELNDMNWKPNYMLPDHVEDLKTIREFRNVFEAELQKLEVDRLQ
LGQEITTTGEGTWPMPVNLKRLIWNAQKTFKIDLRKPSDMHPMEIVEAIDKLQERLKVVP
GDDAMSIEAQKNATLLFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAPG
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK
PGVNSRKESAKNVQCALEYTTLRSVTHATEIWYDPDPLGTLIPEDVDFVRSYYEMPDEDV
DPDKMSPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRIA
NDEAPPKGGEAQGESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKKGKVNKFDEKEGF
KGEEEWMLDTEGVNLLAVMCHEDVDPSRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF
DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAES
DYLRGVTENIMLGQLAPIGTGGCGLYLNDQMLKQAIELQLPSYIDTLDYGVTPARSPSGT
PYHDGMMSPLLSPNFRASPLTDAQFSPYVGGMAFSPMPSNYSPSSGGYSPSSPVFSPGPG
HSYSPTSPSYSPASPSYSPASPSYTPGSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPAYCPTSPSYSPTSPAYCPTSPAYSPTSPAYCPTSPAYSPSSPSYNPTSPSYSPTSP
SYSPTSPSYSPTSPSYSPTSPSYSPSSPTYSPTSPSYRPTSPSYSPTSPAYSPSSPGYCP
TSPSYSPTSPSYSPSSAKYSPSNIYSPSSPRMMSPYSQTSPNYSPTSPSYSPTSPSYAQP
SPSYSPASPITTSGGPSPDYTPTSPNYSPTASYSPTAPGYSPISTEPQTSDKDKETAP
NT seq
5577 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcggttcccgcactcgccggccgaggtggccaaggtcaagctcgtccagttc
ggcgtgctcagccccgacgagatcagacaaatgtcagtggtcatgatagagcacgcggag
actacggagaggggcaaggtgaagtccgggggtctgagcgacccccgtttgggcaccatt
gaccggaaactcaagtgcgacacatgtatggctgggatggccgagtgcccgggccacttt
ggccacctcgagcttgcgaagcccatgttccatatcggcttcatcaagaccgtgctctcc
gtaatgcgctgcgtgtgcttcaattgctccaagatcctcgcggacgaggaagataccaag
ttccagcaggctctgaaaatcaagaaccccaaaaataggttaagaagaatttatgatgct
tgcaagagcaaaaaggtttgctctgggggtgaagaccttgagggtcaggatcagcaggac
actgaagagccagtgaagaaaaaaggtggttgtggggctcagcagccaaatatcacagtt
gatggtatgaagatggttgcagagtttaaaacaacaaagaagaaaaatgatgagcaagat
caactcccggaaccagtggagcgaaagcaaattctctccgccgagagggtccttaatgtt
ctcaagcgtataagtgacgaggactgtcttttattgggcctgaaccctgaatttgctcgt
cctgattggatgatactgcaagtcctcccaattcctccgccccctgtgagaccatctgtc
atgatggatacttcctccagaagcgaggatgatttgactcatcaattagcgatgataatt
cgacataatgagaatttgaggaggcaagagagaaatggagccccagctcacattataaca
gagtttgctcagctgttgcagtttcacattgcaacatacttcgataatgatcttcctgga
caaccaagggccactcagcgttctggaaggcctattaagtcgatttgcagcaggctgaaa
gcaaaagaaggccggattagaggaaatttaatggggaagcgtgttgatttctcagctcgt
accgtcatcacaccagatccgaatatcaacattgatcaattgggggtgccatggagtatt
gctttgaatctgacatacccagaaactgtcactccatacaacattgagaggttgaaagaa
ctagttgaatatggacctcaccctcccccaggcaagacaggagcgaagtacattattagg
gaagatggccagaggctggatcttcgctatgtgaagaaaagtagcgaccagcatttggag
cttggttacaaggtggaaaggcaccttaatgatggagattttgttcttttcaaccggcaa
cccagtctccacaaaatgtctatcatgggccatcgcattaaaattatgccctactcgact
tttcgcctgaacttgtctgtcacttcaccgtacaatgctgattttgatggggatgaaatg
aatatgcatgttcctcagtcatttgagaccagagctgaagttttagagttgatgatggtg
ccgaaatgtattgtgtcacctcaagcaaatagacctgtcatgggtattgtccaggacaca
cttcttgggtgtcgaaaaatgaccaaaagggatactctcattgaaaaggatgtatttatg
aacatcttaatgtggtgggaagattttgatgggaagatctcagcccctaccattttgaaa
ccaaggccgatttggactggcaaacaagttttcaacttgatcattcccaagttaattaat
ttaattagattttcagcctggcacgctgaaacagaaaatggatttacaactcctggtgat
actgtggtccggatagagaagggagagcttctatctggtacactttgcaaaaaaacactt
ggggcatcaagtggaagtcttattcatgttatttgggaagaggtaggtccagatgcggca
cggaagttcttgggtcatacacagtggctggtcaactactggcttctgcaaaatggtttc
agtattgggatcggggatacaattgcagacgcagatactatggaaaaaattaatgagaca
atcgcaaacgccaagattgaagtgaatgggcttattaagcaagcacaagagaaggagctg
gaacctgagccaggacgcacgatgatggaatcatttgaaaatagagtaaatcaggttctt
aacaaggctcgtgatgaatctggcagtagtgcccagaagagtttgtccgagagcaacaat
ttgaaagctatggttactgcaggctcaaaaggcagtttcattaatatttcacaaatgact
gcttgtgtcggacagcagaatgttgagggcaaacggattccatttggttttgttgatcgt
acattgccccacttcacaaaagatgactacggccctgaaagccgtggatttgtggagaac
tcttatcttcgaggcttgacaccacaggaatttttcttccatgctatgggtggtagagaa
ggtttgattgatactgctgtgaaaacttccgagactgggtatattcagcgcaggctcgtg
aaggctatggaagacatcatggttaaatatgacggtaccgttagaaactctttgggtgat
gtcattcaattcttgtatggagaagacggcatggatgctgtttggattgaatcccagaaa
ctggactccctgaagatgaaaaaggatgagtttgataatgtgttccgttatgaactgaat
gatatgaactggaagcctaattacatgctgcctgaccatgttgaggatttgaagaccatt
cgtgaattcagaaatgtgtttgaggcagagcttcagaaattggaagttgacagattacaa
cttgggcaagaaattaccacaactggcgagggtacatggcctatgcctgtcaacctcaag
cggcttatctggaatgctcagaagactttcaagattgatctaagaaaaccttctgacatg
cacccaatggaaatcgtggaagcgattgataagctgcaagaaagactcaaggttgtcccc
ggcgacgacgccatgagcattgaggctcagaaaaatgctactctgctattcaatatcctg
cttcgcagcacatttgctagcaagagggtcttgaaagaatacaggcttacgaaggaatca
ttcgaatgggtcattggtgagattgaatcgagattcctccagtctttggtggctcctggt
gaaatgattggatgtgtggctgcacagtccattggagaaccggcaactcagatgacgctg
aatactttccattatgctggtgttagtgctaagaatgttacccttggtgttcccagatta
agagagatcatcaacgtcgccaagaagataaagactccatctctgtctgtcttcctaaag
cctggggtgaacagcaggaaagaatcggccaagaatgtccagtgtgccttggagtacacc
acgctacgtagtgtgacccatgccactgagatatggtatgatcctgatcctctaggaacc
ctcattcctgaggatgtggactttgtcaggtcatactatgagatgcctgatgaggatgtt
gacccggataagatgtctccttggctgctgcgtattgaactgaaccgcgagatgatggtt
gataagaagttgagcatggctgatattgcagagaagatcaatcatgagtttgatgatgac
ttgtcatgcatattcaacgacgacaacgcagataagctcatccttcgtgtccgcatcgca
aatgatgaagctcctccaaaaggaggagaggcacagggtgaatctgccgaggacgatgtc
ttcctcaagaagattgaggggaacatgttgactgagatggcccttcgaggcattccagat
attaacaaggtcttcatcaaaaaggggaaggttaataaatttgatgagaaggaaggtttc
aaaggagaagaggagtggatgcttgatacagaaggtgtaaacctcttggccgtcatgtgt
catgaggacgttgatccttctaggacaacaagtaatcatttgattgaagtgattgaggtt
cttggcatcgaggctgtccgcaggtctctcttggatgagttgagggtggtgatatctttt
gatgggtcttatgtgaactaccgtcatctggccattctctgcgatacgatgacatacaga
ggtcacctgatggcgattaccaggcacggcataaatcgtaacgacacagggcctctcatg
agatgttcttttgaagagacggtggatatcctgcttgatgctgctgtatatgctgaatct
gattacctgagaggtgtcacagagaacattatgcttggccagcttgctcctattggtaca
ggagggtgtggattgtatctgaatgaccagatgctgaagcaggccattgagctccaactc
ccgagctatattgacactctggactatggtgtcacaccggcgcgttcaccctccgggaca
ccgtaccatgatggaatgatgtctccattgctgagcccgaatttccgggcttcccccctc
acagatgctcagttctcgccgtatgttggcggcatggcgttctcgcccatgccgtcgaac
tacagcccgtcctctgggggttacagtccatcttctccggtgttcagcccagggccagga
cacagctacagccccacttctccgtcatacagccccgcatcacccagctacagccctgca
tcgccatcatatactcctggctctccttcctacagcccgagcagtccatcatactctcca
accagtccatcatactctcccacatctccgagctacagccccacatctcctagctacagt
ccaacctctccggcatactgtcccacttcgccaagctacagtccaacatctccggcatac
tgcccgacatctcctgcatacagcccgacctctccagcatactgcccgacgtctccggca
tacagcccgtcatcgccatcttataacccaacgtcgccatcttatagtccgacatctcct
tcatacagcccgacttcaccatcttatagcccaacatcgccatcatacagccccacatct
ccttcatacagcccttcatcaccaacttatagcccgacgtcgccctcatacagaccgaca
tcgccctcgtacagcccgacatcacctgcatacagtccgtcatcgcctggttactgcccg
acgtcaccgagctacagccctacttcaccgagctacagcccttcttcggccaagtacagt
ccttcaaatatctattctccaagcagcccaaggatgatgagcccgtacagtcagacttct
ccaaactacagcccgacctcaccgtcctactcgcccacctcaccgtcgtatgcgcaacca
agcccgtcgtacagcccggcaagcccgatcactacctctggaggacctagcccagattac
accccaacttctccaaactacagccccactgcaagctactcccccaccgcaccgggctac
tcgccgatatccaccgagccgcaaactagtgacaaggacaaggagactgctccctga
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integrated database retrieval system
