Triticum urartu (red wild einkorn wheat): 125542656
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Entry
125542656 CDS
T08232
Name
(RefSeq) cleavage stimulation factor subunit 77
KO
K14408
cleavage stimulation factor subunit 3
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125542656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125542656
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
125542656
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_2
TPR_15
FTCD_C
TPR_16
Motif
Other DBs
NCBI-GeneID:
125542656
NCBI-ProteinID:
XP_048561738
UniProt:
A0A8R7PMW3
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Position
3:complement(42362678..42373197)
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AA seq
725 aa
AA seq
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MDIYNVEAAEILAHETLNLPIGEAAPIYEKLLATFPTAAKYWKQYVESYIVTNDEETAKQ
IFSRCLLTCPHINLWRCYINFIKKVNSKRGSEGLEETKKAFDFMLNYVGNDVASGPVWME
YIAFLKSMPVMTPQEESHRMTTIRKVYQKAILVPTSHVEQLWKDYDNFENSVSRTLAKGL
LSEYQPKFNSAKAVYRERKKYIDDIDWNMLATPSTGSYKEEQQCLAWKRLLTFEKGNPQR
IDVTAANRRITFTYEQCLMYLYHHPDVWYDYATWHAKNGSTDSAIKIFQRAVKALPGSEV
LKYAFAELEESVGAIQPAKTIYESLVAENSSMPSLAHIQFIRFLRRTEGIEAARKYFLEV
RKLPSCTYHVYVAYATMSFCLDKDAKVAQNVFEVGLKRFMQEPGYVLEYADFLCRLNDDR
NVRALFERALSLLPPEESVEVWKRFAQFEQIYGDLSSMLKVEQRRKEALSRTSEDVVSSL
ENTLYDVVSRYNYMDLWPCSSKELDYLSRQEWLAKNMSKKADRSVMLTSGGGSTLDKGTI
GVGANAKLLPQSTKVIRPETSRMVIYDPRQMKGPVISATSSGYTKEVDEIFKMLSPPLMS
FITNLPAIEGPSPDIDIVLSVLLQSTLPTGHDVGKPSAPVPGPATTDISGPRNQNGSVRR
PPKRKAVERQEEEDAAAAAQSRAMPDIFRLRQIQRNRGGGPAQSGSAAMSSGSMFSGEQS
ANSSS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggacatctacaacgtggaggccgccgagatcctcgcccacgagaccctcaatctcccc
attggcgaggccgcccccatctacgagaagctgctagccaccttcccgacagcggctaag
tactggaagcagtatgtggaatcatacattgtcacgaatgacgaggagaccgccaagcag
atattcagcagatgcttgctcacctgccctcatattaatctctggcgttgttacatcaac
tttattaaaaaagtaaacagcaaaaggggctctgagggtctggaagagacaaaaaaggct
tttgatttcatgcttaactatgtcggcaatgatgtggcatctggccccgtttggatggag
tacattgcattcttgaagtcaatgccggttatgacgccccaggaagagtcacaccgcatg
actactatacgtaaagtatatcagaaggcaattttagttccaactagtcatgtcgagcag
ctatggaaggattatgataacttcgaaaattcagttagccgcaccttggcaaaaggcttg
ctatctgagtatcaaccgaagtttaacagtgctaaggctgtatatagagagcgtaagaag
tatattgatgatattgattggaacatgctggccaccccctctacaggctcctacaaggaa
gagcaacagtgtttggcatggaaaagacttctgacattcgagaaggggaatcctcaaaga
attgatgttacagctgctaataggcgtattacctttacttatgagcaatgcctaatgtat
ctataccatcatcctgatgtatggtatgattatgctacatggcatgcaaagaatggttct
acggattctgcaatcaaaatatttcagcgtgctgtaaaagcactccctggttctgaagta
ctaaaatatgcctttgctgaactggaagagtctgtaggggcgatccagcctgctaagaca
atatacgagtctcttgtagctgaaaattcaagcatgccatcacttgcacacattcagttt
attcggtttctaaggagaacagaaggcattgaagcagctcgcaagtactttttggaagtt
cggaagttgccaagctgcacttatcatgtctatgttgcatatgctacaatgtcgttttgc
ctcgacaaagatgcgaaggtggctcaaaatgtttttgaagttggtttaaagcgatttatg
caagaaccaggatatgtcctcgaatatgcagacttcctgtgtcgcttaaacgatgataga
aatgtacgtgcattgtttgagcgagctctgagcttacttcctcctgaggaatccgtagag
gtatggaaacgatttgctcaatttgagcagatttatggggatttgtcaagcatgttaaag
gtggaacaaagaaggaaggaagctttatctaggacatcagaagatgtcgtatcgtcctta
gagaacacactttatgacgttgtttctagatataattatatggatctctggccatgctca
tcaaaagaattggattacctgtcaagacaggagtggcttgcaaagaacatgtctaagaag
gctgacaggtcagttatgttaactagtggtggcggttctaccttagataaaggcactatt
ggagttggtgccaatgcgaagttattgccgcagtctacaaaagtcatccgtcctgagact
tctcgaatggttatttatgatcctagacagatgaaaggaccagtgatttcagccacatcc
agtgggtacacaaaggaggttgatgaaatattcaaaatgctttctccaccactcatgtct
ttcatcacaaatttgcctgctattgaaggtccatcaccagatatagacattgtgcttagc
gttctactgcaaagcacactgccaacaggacatgatgttggcaaaccgtctgctccagtt
cctggccctgccacaactgatatctcaggtccccgcaaccaaaatggatcagttcgtaga
cctccaaaaaggaaggctgttgaaaggcaagaggaagaagacgcagcagcagctgcgcag
agtcgagccatgccagatatattcaggctcaggcagatccagaggaaccgcggtgggggc
cctgctcagtctggatcggcggcgatgtccagtggaagcatgttttccggggaacagtca
gccaacagctcaagctag
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