Triticum urartu (red wild einkorn wheat): 125542855
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Entry
125542855 CDS
T08232
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 40-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125542855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tua03041
]
125542855
03009 Ribosome biogenesis [BR:
tua03009
]
125542855
Enzymes [BR:
tua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125542855
Spliceosome [BR:
tua03041
]
Complex A
U1 snRNP components
U1 related factors
125542855
Complex B
125542855
Ribosome biogenesis [BR:
tua03009
]
Eukaryotic type
Pre-60S particles
Helicases
125542855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
125542855
NCBI-ProteinID:
XP_048562038
LinkDB
All DBs
Position
3:complement(60531228..60539173)
Genome browser
AA seq
1339 aa
AA seq
DB search
MAGAEAAADSSGPRFAPDDPTLPAPWKALIDGETLYYWNPETNLTQYDKPGAAAPPLPAA
APTPAPGAFAQPGMQQQQPPQQQQQPQQTAQQPPFQYQGQQAQQPPFQYQGQQAQQPLFQ
YQQQQEQMPNQQGSQQPVAPQYPNAHQQPMPYQHGHYMQPQQQYSYQVGQQPQMPQTQYN
QGQQMPIPQAANQGQQPTMPPGAYNQGQRPPMPQAAYSHGQRPPMPQSAYNQGQQPQMPH
ASYNQGQQLQGTRMPQTQVQHTQQSPGFHQPAQASQGLQASQPQVPQMSPQQGQLQHGFQ
FTPQQGKQPHHGHLVSQHGQQNTTVKVDAGAHHEGKQTGFSLPLSQQHGQVPLPNQTLPS
SHQRPEAHNQLNIHGVGGPPYPAKHHLGGSSPGETNNVSFLSAPAQTHQGGVDTNYRQQL
ASSHVVPNHIAPSPGRPPIGFKRGNSEDQFEKNEALSSGRFDGINALHQQPKPAALPPPQ
NHLQDMRNGPPYSQPDNFGGYNMAPPHLVQNPLNNGPFPIGALARPPSGTFSPPDFPSVA
SVDAYRQHHEVTAVGENVPPPFMTFEATGFPPEILSEVHAAGFLNPTPIQAQTWPVALQS
RDIVAIAKTGSGKTLGYLIPAFVHLRRCQNNPMSGPTVLVLAPTRELASQIQDEAIKFGR
SSRVSCTCLYGGAPKGPQLRELERGADIVVATPGRLNDILEMRKISLHQISLLVLDEADR
MLDMGFEPQIRKIVDEIPRNRQTLMYTATWPKEVTKIAGDLLRNPVQINIGSIDELVANK
SITQYVEMVPPMDKQRRLEQILRAEERGSKIIIFCSTKKMCDQLARSIGRSFGAASIHGD
KSQGERDHILGQFRTGIVPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGR
AGATGVAYTFFSEQDWKYAADLVKVLDGTGQQVPPELQQMAARGASGAPRNQAGGMSRWD
SPGGGSRFESAVGGPGGYGGIREGPGGFGGRDGPGGFIDRDGPGRFGDRDGPGRFGGRET
PDGFGGRDGPGGFDGRMGPGPGGFGGREGPGGFGGREGPGPSGFSGRGGRGSDGFGRRGG
ASPGRFGGHGGRGDSPGFGGRGRGDSSGFGGRGRGDFSGGRGGRGRGFGGRGRSDRGPHD
RFISDGRGRYDGRRGFDKGRGRSYSRSPDRSRSRGYDRRSDSRSLSSRSRSRSRSWSRSR
SRSRSWSRSRSRSRSRSRSRDQGPVERRPRVRSGFDVLPPATEAGAAVTGPLPVPLPGSV
SDGTAPIPRQSLADASDMSPMSPGGLVHVQEGAPFMGGNDANISSRQADQPSQATDLAIP
LSFSATANFPGPAVQQDAP
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcagaggctgccgcggattcatcgggcccgcggttcgcccctgacgacccg
acgctccctgcgccttggaaagcactaatcgacggcgagacgctctactactggaaccct
gagaccaacctcactcagtatgacaagccgggtgcggccgcgcctcccttgcccgcggct
gcgcccacgccagcgcccggggcttttgcgcagcctggcatgcagcagcaacagcccccg
cagcagcagcagcagccgcaacagacggcacagcaaccgccgtttcagtatcaaggtcag
caagcacagcaaccgccgtttcagtatcaaggtcagcaagcacagcaaccgctgtttcag
tatcaacagcagcaagaacagatgccgaaccagcaagggtcacaacagccagtagctcct
cagtacccaaacgctcatcagcagccaatgccatatcagcacggtcattatatgcaaccc
cagcagcaatattcatatcaggtgggccagcagccacaaatgccgcaaactcagtataat
caaggccagcagatgccaatcccgcaagctgccaatcaaggtcagcagccaacgatgcca
ccaggagcttacaatcaaggtcagcgtccaccgatgccgcaagctgcctacagtcatggc
cagcgcccccctatgccacaatctgcctacaatcaaggccagcagccacaaatgccgcat
gcttcttacaatcaaggtcagcagttgcagggaacaaggatgcctcagactcaagtgcaa
cacacacaacaatcaccaggctttcatcaacctgcccaggcttcacaaggcttgcaagct
tcacagcctcaagtacctcaaatgtccccccaacagggccaactccagcatggcttccag
ttcacccctcaacagggaaaacaaccacatcatggtcatcttgtctcccaacatgggcaa
caaaataccacggtgaaggttgatgcaggagctcatcatgaaggaaagcagactggcttt
tccttaccgcttagtcagcagcatggccaagttcctcttccaaaccagacgttgccttca
agtcatcaacgtcctgaagcccataatcaactaaatattcatggagtcggagggccacca
tatcctgcaaagcatcatcttggtggatcatccccaggtgaaactaataacgttagtttc
ttgagcgcgcctgctcaaacacatcaaggcggagtggatactaactaccggcaacaactg
gctagtagccatgtagttcccaatcatattgctccttcaccgggtcgacctccaataggt
ttcaagaggggcaatagtgaagatcaatttgaaaaaaatgaggctctctcctctgggagg
tttgatggaataaatgctctccatcagcagccaaaacctgccgctcttccacccccacaa
aatcacctgcaggatatgaggaatggcccaccttattcccagccagataattttgggggt
tataacatggcacctccacatttggtacaaaacccacttaacaatggtccatttcctatc
ggagctttagcgaggccaccatccggaacattttctcctcctgatttcccaagtgtcgct
tcagtagatgcatatcgtcaacaccatgaagtaactgcagtgggtgagaatgttcctcct
ccatttatgacatttgaggctactggattccccccagagatcctgagcgaggttcatgct
gctggcttcttaaaccccaccccaattcaggctcaaacatggcctgttgcacttcaaagc
agggacatagtagccattgccaagacgggatcagggaagacactggggtaccttattcct
gcttttgtacatctgaggagatgccaaaacaatccaatgtcgggccctacagtgttggtt
ttggcccctactcgtgagcttgcttcacaaatacaagatgaagcaattaagtttggtcga
tcatctagagtatcatgcacatgcctgtatggtggagctccaaagggacctcagctcaga
gaacttgagcgtggagcagatattgtggtagctacacctggacgactcaatgatatcctg
gaaatgaggaagattagcctccatcagatttcattacttgtgcttgatgaagctgaccgc
atgcttgacatgggctttgagccacaaatacggaagattgttgacgagattcctcgtaat
agacaaactctgatgtacactgccacttggccaaaggaggttacaaaaatagctggggat
ttattgagaaatcctgtccagatcaatattggtagcattgatgaacttgttgccaacaaa
tccatcacacagtatgtagagatggttccacccatggataagcaacgtcgcttggagcag
attcttagagcggaagaaaggggctcaaagatcatcatattttgctcaaccaagaaaatg
tgcgatcagcttgctcgtagcattggtcgtagttttggtgctgcaagcattcacggcgac
aaatcacagggtgaaagggatcatattctgggtcagtttcggactggtattgtgccagta
ttagtggccacagatgttgctgctcgtggacttgacatcaaagacatcagagtggtgatc
aattatgacttcccaactgggatcgaagactatgtgcatcgcatagggcgtacaggaagg
gctggggctactggagttgcatacactttcttctctgagcaagattggaaatatgctgct
gatttggtgaaagttttggatggtactggtcagcaggtacctccagagctgcaacagatg
gctgcacggggtgcatctggtgctccaagaaaccaggctggtggcatgagccgttgggat
agtcctggtggcggtagtcgttttgaatctgctgttggcggccctggtggttatggtgga
attagggagggccctggaggctttggtggtcgagatgggccaggtggatttattgatcgg
gatggcccgggcagatttggtgatcgagatggccccggccgctttggtggtcgagagact
cctgacggctttggtggtcgggatggccctggtggcttcgatggacggatgggccctggt
cctggtggatttggtggaagggaggggcctggtggatttggtggaagggagggtcctgga
cccagtggcttcagcgggagaggggggcgtgggtctgatggctttggcaggagaggtgga
gcgagccctggtagatttggtggtcacggtggcaggggtgattctcctggttttggtggt
cgtggtaggggtgattcttctggttttggtggacgaggccggggtgatttctctggtgga
cgtggtggaagagggcgtggatttggaggacggggacgttctgaccgaggtccacatgat
cgttttatctcagatggacgtggaaggtatgatggccgtcgaggatttgacaagggtcga
ggcaggagctacagccgtagcccagatagaagccgctcgcgaggctatgacagaagaagt
gatagcaggagcctaagtagtaggagcagaagccgtagcagaagctggtcacgcagcagg
agccgcagcaggagttggtcacggagccgcagccgtagtcgcagcaggagcagaagccgt
gatcagggtccagtagaacgcaggccgcgggtaagatctggttttgatgtgctgccacct
gcaactgaagctggagctgctgtaactgggccacttcctgtaccactacctggttcagtg
tctgatggtactgcacccatacctagacaatcgctggcggacgcatctgatatgtcacct
atgtcgcctggtggcttggtccatgtccaggagggtgcaccgttcatgggtgggaacgat
gccaacattagcagcagacaggctgaccagccttcccaagcgactgatctagcaatacca
ctgagcttctctgcaactgcaaattttccagggccggcagttcagcaggatgccccatga
DBGET
integrated database retrieval system
