Triticum urartu (red wild einkorn wheat): 125542985
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Entry
125542985 CDS
T08232
Name
(RefSeq) uncharacterized protein LOC125542985 isoform X1
KO
K19026
spatacsin
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
125542985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tua03400
]
125542985
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125542985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
125542985
NCBI-ProteinID:
XP_048562186
UniProt:
A0A8R7TT53
LinkDB
All DBs
Position
3:complement(76894822..76917346)
Genome browser
AA seq
3114 aa
AA seq
DB search
MPISYEMEGGPTVLQLYKWKSLHPCLELSKFCEASISPTRSLFGLLSEHGDLVLSTVNVQ
PSQVESPMALSDSSLPVFECFSSIPRVKSLAWGHCCDASSQLEVPAFSEFLVLSSDDSIT
VHAFCHSDKSAVTVNCDTKELHGEWKEWFPTKCSVPEDGESGARNCFRSFLTTISAAVCN
GKYQARFPLKSSLPHSAEVVSFSIYDITMSFLKFWLSSSAMKTRTETDSGSPEDLPSHGP
VAEASCSCQWECLKVLPSSSGYLTGLVLTPNESVNCEVHQHNAKNILVAILELNHWGIQW
NFVVDLQTAYDDVEPNPQWVDFQLSDIFLASINAVGFVAIWNAKTGHPISSFSVLDWCRI
DLEMPLPTVTNVGESTCVENVIGRMFKRLVLAPHSPLVAAVDEAGVVYVFYADDILNFKA
NAHEKFDQPSINHYGNNFAAWETAGHEIGSQTFCSHQPIRQGSLNPDKMVYDFSDRYNAG
VVGARKRRKYCKCNENQVDSWPSGFSTTSQMKDVVTYSSTMVGSAHVRRVVLPPCRSQEN
VISLSPFGLTRIFRSCNAEGHKHVKIIHTELLMASCSLDERDIDAGFLDRSLPYQKDFSF
AGESAVCSFQGYLYLISQDNLSVVLPSVSVSSFSSRIDATQFWQPGFSGGSACNALNLLS
VNRLRTRLEAWQIEVLDKALLYEGPSLADRLCWENGWDMKISRLRWVQLSLHYTNINDLE
QSLNMLAEVDLAEEGVLQLLLASVYRLLCSTRSDHEAAVSSKLMVLAVRFATRTIKAYGL
LKQKKDMPANSVKLHEMAFLLGVIRSIQGRITAKNQNSVRMQGDDKNSLKIGKEVLQNDS
PSPVVVVDGVSPELSAGLDAPDRQGSTSTAFEFVPGSNRLLALTQVESSLTTSHDNDTDQ
RTTQVGRLVTQGNIKDMMNRWEMNKFDLKTIVGEALQSGRLPLAVLQLQLLRQRESCSGD
DFDDVFSEVHEIGRSIVYDLLMKGESGLAVATLERLGDDIESDLRQLMQGTVRRSLRLQI
AEEMKQRGYMRSNEWKMLETLALIERFYPSSSFWDTYLGRENVIHDAVNIVTLPGEDKPV
LALHIRNHPAIECGDVDGAVLGSWVNVNDYADLKEFSQSNLSDGYWVCAAVWSDAWDQRT
VDRIILDQPCHISAQSDLPWESQFEYFVAHDDVGEVCKLLDMIPDSVLLEGILSINVDNS
RAGYSIVSDVSVPDYKMYICDSEELEPVCMEVPHVKIFRSLSNHESTSWMRMLMQEQLAK
KHIFMKEYWQSTTEIIPLLARAGILTNTAKIGPKKEASMPLIASEMPDDERHQACERALH
KLVIRFCVQYDSPYLLDLYLDNCNLILGEDSIPLLKEAAGDCKWAQWLLFSRVKGYEYEA
SFSNARWNLSQKMVNHGNLTAIEIDEILYTVDDMAERIGEMSALATLMYASPPIQKSICT
GSVNRNRGLSSQCTLENLGHCLQQFPTLWKTLRSTCFGQDGYGCLNYSPTNVSGKSAMSD
YLCWRYSIFSSAGGDTSLLQMLPCWFPKSIRRLIQLFEQGPFGMQLLSSAPSSEELFTHG
VTDYIYNTTGYSETNALSLEASIQKSVEEELYSSLEEKDLRVEHHLHRGRALAAFRHLLG
KRASQLKSANARQVISTQSDVQADVQLILAPLSQTERSVLLSVAPLAITNFEDSTLVASC
TFLLELCGMCANMLRLDIAALQRISSYYNLAQQNKQSELSSPRSSGLHVLSHGADIAPAL
ARALAEDYVQSDHLQILEQKQTSRGPKREQPSQPLIAILEHLERASLPLLDEGRTCGFWL
LSGIGDASLYRSQQNEASQHWNLVTEFCLAHHLPLSTKYLALLANDNDWVGFLTEAQRAG
FPIEVVIGVASKEIKDSRLRTHILTVLKNTLSNRRKSSSNVPSGSRDPSLLSVDGDDPME
LFCILAVCERQKNPGEALLNKAKQMQWSLLALIASCFPDVTLLSCLSFWLEITAARELSL
IKVDGISSKVAKNVGSAVEVTNKLPSVSRNVEYRYNRKNPKRRRFLEASPDSFKSGFSLD
IASGPNGTATSNPSDIDAHQERRKPTSEETDIPVDIDERLASLSSIVAVLCEQQLFLPLL
RSFDLFLPSCSLLPFIRSLQAFCQMRLSEASAHLTSFSARIKDEASQSNSFKEASSITGW
VVATAVKAADAVLSTCPSLYEKRCLLQLLAAVDFADGGSSSAYFGRSYWKINLAEPSLCK
DGDIYKWNDSMDDASLLAALEKDGRWEDARTWARQLESSGIAWESTFDHVTESQAEAMVA
EWKEFLWDIPQERAALWGHCQSLFMRYSLPPLQAGLFFLKHAEALGKEIPARELHEILLL
SLQWLTGTITKSSPVYPLHLLREIETRVWLLAVESETHSKADGESSVVSQSLAIGNSTSI
IEQTADVITKIDSSMSLPSMKAAERNGMRDNNLSNHQHLHLFEYNSEATTTTNNARAKRR
GKTNLPLRRGVTDNVESSTNDSDDNSKVFFRSKIGEQARNLLSEEEFAKMEASLSGWEQH
VRPADMEKAVLSLLEFGQITAAKQLQQKLSPSYVPEELVLVDVALRVANDGGDGEINLLS
FDTEALSILQSLQIASGSNMIDPSQAMEKLAVKCGEGRGRALIRRIIAVVQTAKILGLPF
SEAFEKQPIELLQLLSLKAQDSFDEAKFLVETHIMPASSIARILADSFLKGLLAAHRGGY
LDSQKEEGPAPLLWRSSDFLKWAKLCPSEPEIGHALMRLVMTGHEVPHACEVELLILSHH
FYMSSSCLDGVDVLVTFAANRVDSYVSEGDFSCLARLITGVSNFHSLSFILSILIENGQL
ELLLQKYSSTDTATVAPASVRGFRLAVITSLKHFNPNDDEALSLVYKHFDMKHEAASLLE
SRAEQYMESWLDRHDKERRNDELLKAMHNLVQTAEILSTIDAGQRTHRACARASLLSLQI
RIPDLVWIGLTETNARRIFVDQSRFQEALIVAEAYSINQPMEWAPVFWNQMLKPDLIELF
VAEFVLVLPLHPPMLVELARFYRAEVAARGDQSHFSVWLSPGGLPAEWGKHLGRSFRSLL
RRTRDMRLRLQLATLATGFSDVLEGCNAVLDKVPENAGPLILRKGHGGAYLPLM
NT seq
9345 nt
NT seq
+upstream
nt +downstream
nt
atgcccatatcttatgagatggagggtgggcctactgtactgcagttatataagtggaaa
agcttgcatccctgtcttgaactatcaaaattctgtgaagcgtccatttctcctacaagg
agcctgtttggactgctctcggaacatggcgatcttgttctgtcaactgtcaatgtccaa
ccatcacaagttgaatcacctatggctctctcagatagtagcttgccagtgtttgagtgt
ttttcttctattcccagggtgaagtctttagcatggggacactgctgtgatgcttctagt
caacttgaggttccggctttcagtgaatttcttgttttatctagtgatgattctatcaca
gttcatgcgttttgtcattctgacaaaagtgcagtaacagtcaattgtgatactaaagag
ctgcatggggagtggaaagaatggtttcctaccaagtgctcagtgccggaggatggcgag
tcgggtgcaaggaactgctttcgctcttttctgactacaatcagtgcagctgtttgcaat
ggaaaataccaagccagatttcctctgaagtcttcattgcctcattctgcagaggtggta
tcatttagcatatatgatattactatgtcctttctgaaattctggttaagcagttctgct
atgaagactaggacggaaactgacagtggatctcctgaagatcttccaagtcatggacct
gtagctgaagcatcatgcagctgccagtgggaatgtttaaaagttttgcctagctcttcc
ggttatttgaccggtttagtgttaactcctaatgaatctgtaaattgcgaggtccatcaa
cacaacgccaaaaatattttggtggctatccttgagctaaaccattggggtatacagtgg
aactttgtggtagaccttcagactgcatatgatgatgtagaacctaatccacagtgggtc
gatttccaactgtcagatatatttcttgcctccatcaatgcagtgggttttgtcgccatt
tggaatgcgaaaactggtcaccctatcagctcgtttagtgttcttgattggtgcagaata
gatctggagatgcctttgcccactgtaacaaatgtaggagaaagcacctgtgttgagaat
gtcattggcagaatgttcaagaggttagttttggcaccacattctccacttgttgctgct
gtagatgaggctggggtagtctatgtgttctatgctgacgatatcttaaatttcaaagcc
aatgctcatgaaaagtttgaccaaccttctataaatcattatggcaataattttgctgcc
tgggaaactgctggtcatgagatcgggagtcaaacattttgcagtcatcagccaattaga
caagggtcacttaatccagacaaaatggtatatgatttttcagatagatacaatgctggt
gtcgtcggagctaggaaaagaagaaaatactgtaaatgtaatgaaaatcaagtggatagc
tggccaagtggtttcagtactacatcacaaatgaaagatgtggtaacttattcttccaca
atggtgggttctgctcatgtgcgaagagtagtccttcctccatgcagatcacaggagaat
gtaataagcctctcaccatttggactgacaaggatctttagaagttgcaatgcagaggga
cataaacatgttaaaattattcacacggagttgcttatggcttcatgttcacttgacgag
agagatattgatgctggttttctggacaggagcctcccatatcagaaggatttttctttt
gctggtgaatctgctgtttgctcctttcagggatatttgtatttgatttcgcaggataac
ctttctgtggtccttccatcagtgtctgtatcgtctttttcatctcgtatcgatgccact
caattttggcaaccaggtttttctggtggtagtgcatgcaatgctctgaatttgttgtca
gtaaatagacttcgaacaagattggaggcctggcaaatagaggttttggataaagcattg
ttgtatgaaggaccttcattagcagacaggctctgctgggagaatggatgggacatgaaa
atctctaggctgcgctgggtgcaattgtcattgcattacacaaatatcaatgatctggag
caatcgttgaatatgctcgcggaggttgatcttgcagaagaaggtgttttgcaactgcta
ttggcatctgtttatcggctattatgtagcacaagaagtgatcatgaggctgcagtgtca
tccaagttaatggttttagcagtccgctttgcaacgagaacaatcaaggcttatgggcta
cttaagcaaaagaaagacatgccagccaattcagtaaagcttcatgaaatggctttcctt
ttgggagtaattagaagtatccagggccgaatcactgcaaagaaccagaattcagtccgg
atgcaaggagatgataaaaactcactgaaaataggcaaagaagtactacaaaatgattct
ccatccccagttgttgtagtggatggtgtttcaccagaactgtcagctggtttagatgct
cctgacagacaaggatcaacatctactgcatttgagtttgttcctggtagtaacaggctg
ttagcattaacgcaagttgaatcctcccttactacttctcatgacaatgacactgatcaa
agaaccactcaagttggaagactggttactcaaggaaatatcaaggatatgatgaaccgt
tgggaaatgaataagtttgacttgaaaacaatagtcggtgaagcactacaatctggtcga
ctaccgttggcagttcttcagcttcaactgttgcgccagagggaatcatgttctggtgat
gattttgatgacgttttctccgaagttcatgaaataggaagatccattgtttatgatctg
ttaatgaagggtgaaagtggactggcagtagctacactagaaagactaggagatgacata
gagtcggaccttagacaacttatgcaaggtactgtcagaaggtcacttaggctacaaata
gccgaggagatgaaacagcgcgggtacatgcgatcaaatgagtggaagatgttggagacc
ttagcactgattgagcgtttttacccaagcagcagcttctgggacacatatcttggcagg
gagaacgttattcatgatgctgtaaatattgttacacttccaggggaagataaaccagtg
cttgctctccatattcgcaaccaccctgctattgaatgtggtgatgttgatggagctgtg
cttggttcttgggtgaacgttaacgattacgctgatttaaaggagttctctcaaagcaac
ctttccgatggatattgggtgtgtgctgctgtgtggtctgatgcttgggatcaaagaact
gtggaccgcataatactggaccagccttgtcatatctctgctcaatcggacctcccatgg
gaatctcagtttgaatattttgttgctcatgatgatgtgggggaagtctgcaaactcttg
gacatgattcctgacagtgtacttctagaagggatacttagcattaatgtggacaattca
cgagctggttacagcattgtgtctgacgtcagtgtccctgattataaaatgtatatatgc
gactcagaggagctagagcctgtttgtatggaagtaccacatgtcaaaatattcagatcc
ttgtctaatcatgaatcaacatcatggatgagaatgctaatgcaggaacaactggcaaag
aaacacatctttatgaaagagtactggcaaagtactaccgaaattatacctttacttgct
cgagctggcatacttactaatacagccaagataggccccaagaaagaagcttctatgcca
ttaattgcttcagagatgccagatgatgaacgtcaccaggcttgtgaaagagcattgcat
aaactagtcatccgtttttgtgtgcaatatgactctccatacctactcgatctctatctg
gacaactgcaatttgattctcggggaggactctattcctttgctcaaagaagccgcaggt
gattgcaagtgggcacaatggttactcttctccagagtcaaaggttatgagtatgaggca
tccttttctaacgcccgttggaatctgtcacagaaaatggttaatcatggcaatctaact
gcaattgagatagatgagatattatatactgttgatgatatggctgaacggattggggaa
atgtctgcactagctaccttaatgtatgcttcaccaccaattcaaaagtccatatgcact
ggcagtgtgaacagaaatcgtggattgtcttctcagtgcacattagagaacctaggtcat
tgtctccagcaatttccaaccctatggaagacacttcgttccacctgttttgggcaagat
gggtatggctgtctaaattattctccaactaatgtttctggaaaatccgcaatgtcagat
tacttgtgctggcgctatagcattttttcctctgctggaggagacacttcattgttgcaa
atgctcccgtgttggtttccaaagtctattagaagattaatccaactatttgaacagggc
ccttttgggatgcaactgctatcgagtgcaccgtcatctgaggagttatttactcatggt
gtcactgactacatatacaataccactggatatagtgaaaccaatgcgttgtccttagaa
gcatccattcaaaaaagtgttgaagaagaactatattcttccctcgaggagaaagacttg
agggtggagcatcatttgcaccgtggccgagcactagcagctttcaggcatcttcttggt
aaaagagcttcacaattaaaatcagcaaatgcgcgccaagtgatctccacacagtctgat
gttcaagcagatgtacaactgatcctagcccctttaagtcaaactgaacgatcagttctt
ctatcggtggctccactagctatcacaaacttcgaggactccacactggttgcttcctgc
acattcctgttggaactatgtggcatgtgtgctaacatgctccgcctagatattgctgct
cttcagcgcatctcttcctactataacttggctcaacaaaataaacaaagtgagctatct
tcaccaaggagctccgggttacatgtgctctcccatggggctgatattgctcctgctctt
gctcgagcattagctgaagattatgtccagtctgatcatcttcagattttagagcagaag
caaacctctaggggtcccaaaagggaacaaccatcacagcctcttattgctatactggag
cacctggaacgagcaagtttgccattattagacgaaggtagaacctgtggattttggctc
ttgagtggcattggtgatgcatctctttaccggtcgcagcaaaatgaagccagccaacat
tggaatttggttacagaattctgtctggcgcaccatctcccattaagtacaaaatatctg
gctttactggccaatgacaatgattgggttggttttctaacagaagcccagagagctggt
tttccaattgaagttgttatcggagtggcttccaaagagataaaggactcaagattgagg
actcatatactaacagttctgaaaaacacgttatcaaatagaaggaaatcgtctagcaat
gtaccctcaggtagtagggatccatctctcttgtctgttgatggcgacgaccccatggaa
cttttctgcatacttgctgtttgtgaaaggcaaaagaaccccggggaggcacttctgaat
aaagcgaaacaaatgcagtggtctttattggcgttgattgcttcatgctttccagatgta
actcttctctcatgcttaagcttttggcttgagattacagctgcaagggagttgtcctta
atcaaggtggacggtatttcctctaaagtagctaagaatgttggatctgctgttgaggtc
acaaataaattgccaagcgtgagtaggaatgttgaatatcgttacaacaggaagaatcca
aagcggagacggttcttggaggcctctccagatagcttcaaatcaggtttttcgctggac
atcgcaagtgggccaaatggtactgcaacttccaatccttccgatattgatgctcatcag
gaaagaagaaagcccacctctgaagagactgatattccagttgatattgatgagaggctt
gcatctttatcaagtatagtagcagtgctgtgtgaacaacagctgttcctaccgttactt
cgatcctttgacttgtttctgccatcctgctcccttctccccttcattcgttctcttcag
gcattttgtcaaatgcgcttgtccgaggcttctgcacatttgacatcattttcagcaagg
ataaaagatgaagcctctcaatcaaactcattcaaagaagcatcatcaataacaggatgg
gtagttgctacagctgtaaaagccgcagatgcagtactctcaacctgtccatcactttat
gagaagaggtgtttgctacagctccttgcagcggttgattttgcagatggtggttcttcg
tcagcttacttcggccgcagttattggaaaatcaatctggctgaaccgtccttatgcaaa
gatggtgatatctacaagtggaacgattccatggatgatgcttctctcctggcagcatta
gagaaggatggacgatgggaggacgctcgtacttgggcaaggcaactggagtcgagtggc
atagcttgggaatctacttttgatcatgtgacggaatcacaggcagaagctatggttgcc
gaatggaaggagtttctctgggatattccacaagaacgtgcagctttgtggggccactgt
cagtcgcttttcatgagatattctttgccacctttacaggctggattatttttccttaag
catgctgaagcattagggaaagagataccagcacgagagcttcatgaaatacttctgcta
tctttacagtggcttactggaactattactaaatcctctccggtatatcctcttcatctt
ctccgggaaattgagactagggtttggctcctggcagtcgagtcagagactcactctaag
gctgatggcgaatcttctgttgtttctcagagtctagctattggaaacagtaccagtatt
atagaacagactgctgatgtcatcacaaaaatagacagtagtatgagtttgccaagcatg
aaagctgcagaaagaaatggtatgagggacaataacttatcaaaccatcaacatttgcat
ctctttgaatataacagtgaagcaacaacaacaacaaataatgcaagagcaaagcgaagg
ggcaaaacaaatctaccacttagacgaggtgtcactgataatgttgaaagtagcaccaat
gattctgatgataattctaaagttttctttcgttctaagattggagaacaagcaagaaat
ttactatctgaagaggaatttgcaaagatggaagcgtctctgtctggttgggagcaacat
gtcaggcctgcagatatggagaaggctgtgctctccttattagaatttgggcaaataact
gcagctaagcaactccaacaaaagttatctccatcatatgttcctgaagaacttgtcctt
gttgatgttgcgttaagagttgcaaatgacggtggtgatggagagatcaatttattatcc
ttcgacacagaagccctttcaatacttcaatctctccagattgcaagtggcagcaatatg
attgatccatcacaggctatggagaaattagccgtcaaatgtggcgaggggcgcggacgg
gctcttattaggagaataatagcggttgtgcaaactgcaaaaatactgggactcccattt
tctgaagcatttgagaaacagccaattgaacttctgcagttgctttcactgaaagctcag
gattcttttgatgaagctaaatttctggtggagacacacattatgcctgcatctagcatt
gcaagaattcttgctgattcctttctgaaggggcttttagctgcacatcgtggaggttat
ctggactcccaaaaagaagaaggccctgcaccactattgtggagatcaagtgacttcttg
aagtgggcaaaactatgcccatcagaaccagaaattggccacgctttaatgcgtttggta
atgactgggcatgaagtaccgcatgcttgtgaggttgaactccttatactgtcacatcac
ttctacatgtcatcttcttgtcttgatggtgtggatgttctcgtcacatttgcagccaac
agagtggattcatatgtttcagagggggatttttcttgcttagctcgcttgataactgga
gtgagcaattttcactccttgagcttcatcctttccatccttatagaaaatggccaattg
gagttgctacttcaaaagtattcttccactgacacagccacagtggcacctgcatcagtt
cgagggtttaggttggctgttattacttcactgaaacatttcaacccaaatgatgatgag
gctctgtctctggtatacaagcacttcgacatgaaacatgaggcggcttccctccttgag
tcgcgtgcagagcagtacatggaaagctggttagatcggcatgataaggaacgacggaat
gatgagctccttaaggctatgcataaccttgtacagactgctgagattctttcaacaatt
gacgctggccaaaggacacatcgtgcttgcgctcgtgcttctctcctatctcttcagatc
cgaatacctgatcttgtatggattggtcttacagaaaccaacgcacgccggatttttgtg
gatcaatctaggttccaggaggccctcattgttgccgaagcatacagcataaatcagcca
atggaatgggccccagtcttctggaaccagatgctgaaacctgacctcatcgagctattt
gtggctgaatttgtactagttctgcccctgcacccaccaatgctcgtggagcttgcgaga
ttttaccgggccgaggttgcagccaggggcgaccagtcgcacttctcagtctggctttca
cctggaggcttgcctgctgagtggggaaagcatctcggcagatcattcaggagtctgctg
cgtcgaacaagggatatgaggctgaggctgcagttggcaactctggcaactgggttcagc
gatgtccttgagggctgcaatgcggttctggacaaggtccctgagaacgctgggccgctg
atactgaggaagggccatgggggtgcatacctccctctcatgtaa
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integrated database retrieval system
