Triticum urartu (red wild einkorn wheat): 125543212
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Entry
125543212 CDS
T08232
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tua03041
]
125543212
Enzymes [BR:
tua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125543212
Spliceosome [BR:
tua03041
]
Complex C
Other components
Complex C specific factors
125543212
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
AAA_22
DEAD
AAA_30
AAA_29
AAA_19
AAA_7
Cas3-like_C_2
nSTAND3
AAA_23
T2SSE
Motif
Other DBs
NCBI-GeneID:
125543212
NCBI-ProteinID:
XP_048562438
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Position
3:complement(117145862..117162231)
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AA seq
711 aa
AA seq
DB search
MSRFWRPGAEKPSASLVDDEEGGVLFLPTNTNASSSSSGFGYASLERLRQRLPVYKYRKA
ILYLVERHATTIIVGETGSGKSTQIPQYLKEAGWAEGGRLIGCTQPRRLAVQMRACTRLF
FWTVASRVAEEVGVKLGEEVGYTIRFEDETNPGMTMIKFLTDGVLIREMMEDPLLSKYSV
IMIDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEARSMSTFFSNRWKNSLLKPA
DGLPNPEPAILSVEGRGYTVETHYLEEPVSDYLQAAVNTVLIIHEKEPPGDILVFLTGQD
DIDAALKLLNDEIQHLGKHYFDLVILPLYSGLPRGDQDLIFAPTSKGKRKVVISTNIAET
SLTLEGVVYVVDSGFSKQKCYNPISDLESLVVAPISKASARQRAGRAGRVRPGKCFRLYT
EEYYLNEMQSDGIPEMQRSNLVSCIIQLKALGIDNILGFDWPASPSPEAMIRALEILFSL
GILDEDAKLTVPIGFQVAEMPLDPMISKMILSANDFGCSDEILTIAAFLSVQSVWVSMRG
VKKEFDEVKLRFAAAEGDHVTFLNIYKGFHQSGKSSQWCYKNFLNHQALKKVIEIRAQLV
RVMKRFGIQLKSCDRDMQAVRKAIIAGSFANSCHLEEYGQNGMYKTIRTSQEVYIHPSSV
LFRVNPKWVVYQSLVSTDKHYMRNVIAIEPSWLTEAAPHFYQFRTPNPAPH
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggttctggagaccgggggcggagaagccgagcgcatcgctcgtcgacgacgag
gagggcggcgtcctcttcctccccaccaacaccaacgcttcctcctcctcctccgggttt
gggtacgcgtccttggagaggctgaggcagcggctgccggtgtacaagtaccgcaaggcc
atcctatacctggtggagcggcatgccacgaccatcatcgtcggcgagacgggtagcggc
aagtccacgcagatccctcagtatcttaaggaggctggttgggccgagggtggtcgactt
ataggttgcacccagccaagacgattggctgtgcagatgagagcatgcaccagattattc
ttttggacggttgcatcaagagtagccgaagaagttggtgtgaaacttggagaagaagta
ggatatactataagatttgaggatgaaacaaaccccggcatgaccatgatcaaatttctc
acagatggagtactgattagagaaatgatggaagatcctcttttaagcaaatatagtgtc
attatgatagatgaagctcatgaaagatccatttcaaccgacatattgctgggactcttg
aaaaagattcaacgccgccggccggagttgcgcctaatcatttcctctgcaacaattgaa
gcaagatcaatgtcaacctttttcagcaataggtggaagaattcattgctcaagcctgct
gatggtttgccgaatccagaacctgctatactttctgttgaaggtagaggatatacagta
gaaactcattatctggaagaacctgtctcagactacttacaggctgctgtgaataccgtt
cttattattcacgaaaaggaaccaccaggggatattttggtgtttctaactggccaggat
gacatagatgctgctcttaagttgctaaatgatgaaattcaacatctgggaaaacactat
tttgatttggtgattttgcccttgtactccggccttccgcggggagaccaagatctcatt
tttgctcctacttcgaaagggaaaagaaaagttgtgatatcaacaaacattgccgagaca
tcattgactctggagggtgtggtgtacgttgttgatagtggattttccaagcagaagtgc
tataacccgatttctgaccttgagagtctggttgtcgcaccaatatcgaaagcttctgca
aggcaacgagcaggcagagctggaagggtgcgacctgggaaatgctttaggctttacaca
gaggaatattacctaaatgaaatgcagtcagatggcattccagaaatgcaaaggtctaac
cttgtttcctgcataatacagttgaaagcgctaggcatagacaacatcttggggtttgat
tggccagcttctccatcaccagaggcaatgattcgagctctcgaaattctattttcacta
ggaatccttgatgaagatgccaaactaacagttcccattggtttccaagttgctgagatg
cctctggaccccatgatctcaaaaatgatcttgtcagcaaatgattttggatgctctgat
gagatactgacgatagcagcatttctatctgttcagtctgtgtgggtctctatgcgggga
gtgaagaaggaatttgatgaggtcaaacttcgatttgctgctgctgagggtgatcatgta
acattcctgaatatctacaaaggatttcaccagtctggaaaatctagtcagtggtgttac
aagaactttttgaatcaccaagcactgaagaaggtcattgaaatcagggcacagcttgtc
agggtaatgaagaggtttggcatacagctgaaatcctgcgacagagatatgcaggcagtt
agaaaggcaattattgctggttcgtttgctaattcatgtcatctggaggaatatggccag
aatggaatgtataaaacaattaggacgtcacaagaagtttacattcatccatcttccgta
ctctttagggttaatccaaagtgggtcgtctaccagtctcttgtttcaactgacaagcac
tatatgcgtaatgtcattgccatcgaaccatcatggcttactgaagctgcaccgcatttt
taccagttccgaacacccaatccagctccacattaa
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