Triticum urartu (red wild einkorn wheat): 125543383
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Entry
125543383 CDS
T08232
Name
(RefSeq) LOW QUALITY PROTEIN: tRNase Z TRZ3, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tua03016
]
125543383
Enzymes [BR:
tua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
125543383
Transfer RNA biogenesis [BR:
tua03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
125543383
Prokaryotic type
125543383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
125543383
NCBI-ProteinID:
XP_048562666
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All DBs
Position
3:152635584..152649473
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AA seq
1566 aa
AA seq
DB search
MPPQVPSPLRRFLPLSQTLAPAPLLYLSRRLFFSSVSAPRSPFTRAAGIRPLVYRCQASR
HHPRRGNSTARKEPEGMASGGGGGGKDAGVAFNKMRAEGRDVRKDRSMELKNRRANPIST
TSYVQILGTGMDTQDTAPSILLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFFTRVC
SETAGGLPGLVLTLAGMGDEGMSVNIWGPSDLDFLAGAMKSFIPNRAMLHTHSFGVEHSA
SSSQSTEATVIIDDEVVRISAMFVKPRYNNEARNSTDINSKPGDTAIVYSCELAEIKGKF
DPDKAQALGLERGPKYRELQLGNSVKTEAGRMVHPSEVLDPPIPGPIVLLVDCPTQYHMH
ELFLLQSLSRFYEDSSCQTENAKKVNCIIHLGPSSVTNTVDYQNWMKSFGTTQHIMAGHE
NKNMEVPILKGSARISSRLNFVCPQLFPSSGFWPVEPANGIDLEKNKSTSFQACESVTAA
NLLKFRLRPYAQLGLDRASIPSLFSYEEIVDELISEIPEIKEVPEQISKFWQSSVDQKNA
LAPAGKHMLMVEEPWISKDSCLPDILDEQGNSAKFQDDSSLRESVWRKRPKGNSETPCCV
ENATREDMEITFLGTGSSQPSKYRNVSSIYINLFARGGMLLDCGEGTLGQLKRRFGVSGA
DEAVKNLRCIWISHIHADHHTGLARVLALRSKLLNGVPHKPLLVIGPKQLLRFLNAYSTL
EDLDMQFLDCRQTLKPSVEELLGDNATESATTQLENTMFAPGSRMENYNKKPSSLKDTTA
LANLKEVLHESGLEILYSVPVVHCAQAFGVVLRAKEKVSSAGKAIPGWKVVYSGDTRPCP
ALVDASRDATVLIHEATFEDSMKDEAIARNHSTTKEAIAVGTSAGAYRIILTHFSQRYPK
IPVFDEDDMHKTCIAFDLMSVNLADLPVLPKVLPHLKLLFKDEMVVEESDEALRLIKYAV
GKSGTDFKREMQRHSAAMRQLVHYKGHPDPLKGDALNKAVRETANEAIAAIFSTEDPKAV
VVTEGLGKRIQGFGNTNYEPSRDDKKSFLSELSEVVGIGGASIKQGLSNFAATHSMMPND
NGGMYKNPIRRSLTTETDRYGRYDPSEIQGESRATSGASKNVSSGSWGPSPSSSASAGDT
ESSQPGIKIREERLLETIVTASGVRLQPTRDALQIFLTEASKLDAVALSRALESKLNSPL
WQVRMKAICVLEAVVRKQDTDPYSIVASYFSENSASVVRCCELPQVSLREKASKVLNLLV
GEQPTGSKHLSESRTTPTPVQMPDLIDTGDQDDLVTQSSAQESSEQIXGNSNYASSVDDL
LGGETIGNTSGTSNGNGSDLFADVSFHEEEIKETNDLFSGMTVEEKSSAPVHDNSLIEQD
IFGSSPEPLFQERVDDKGTVNDLMAGLNLNGTTQAQPGLKAETNSNLNGSQFFDMNSQNS
HVASGAALNGILGQSSFYQQVPMQYNLSPQMFGQSFAGQQLNYGAMEALLAQQQQLLQNL
GNFNAGLGHPAFNSMSGGNASGMPDIFNSSNQPPHQVALMSNSKKDETKAFDFVSDHLAA
ARGSKK
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcaagtgccttcccctctccgccgcttcctccccctctcccaaaccctagct
ccggccccgctcctctacctctcgcgccgcctcttcttctcttccgtctccgctccccgc
tcccccttcacccgtgccgccggcatccgccccctcgtgtatcgctgccaggccagccgc
catcacccccgccgtgggaacagcacggccaggaaggaacccgaggggatggctagcggt
ggcggtggcggtggcaaagacgcgggggtggcgttcaataagatgcgtgcggaggggagg
gacgtcaggaaggacaggagcatggagctcaagaaccgcagggccaaccccatcagcaca
acctcctacgtgcagatactcggtacaggaatggacactcaagataccgctccttcaatt
ttactattctttgacaaacaaagatttatatttaatgctggcgagggtcttcagcgtttc
tgcactgaacacaagataaagttgtcaaagattgaccacatctttttcactcgcgtgtgc
tcagaaactgcagggggccttccaggtctcgtgctaactcttgctgggatgggagatgag
ggcatgtcggtgaacatatggggcccttcggaccttgattttctagcaggcgcgatgaaa
tcttttatcccaaatagggcaatgcttcatacacacagctttggtgtggaacacagtgca
tcttcttcacaatctacagaagctactgttattattgatgatgaagtagttcgtatatca
gcaatgtttgtcaaaccgaggtacaacaatgaagccaggaattcaacagatatcaactca
aagcctggtgatactgctatagtctactcatgtgaattggcagaaattaaaggaaaattt
gaccctgataaagctcaggcccttggtcttgagcgtgggccaaagtatcgtgaacttcaa
cttgggaactctgtgaagactgaagctggtagaatggttcatccaagtgaggttctcgac
ccaccaattcctggaccaatcgtacttctagtggattgccctacacaatatcacatgcat
gaactgtttttgctgcaatcacttagccgcttttatgaagattcttcctgccaaacagag
aatgccaagaaagtaaattgcataatccacttaggtccatcttctgtgacaaatactgtt
gattatcagaactggatgaaatcttttggcaccacacagcatatcatggcagggcatgaa
aataaaaacatggaagttcctatcctgaaaggtagtgcaaggatatcttcacgtcttaat
tttgtatgccctcagctcttcccatcctctgggttttggcctgtggaacctgcaaatggt
attgatttggagaagaataagagtacttcattccaagcctgtgaaagtgtgacagcagca
aacttgctgaagtttcgtctgcgtccatatgctcaactggggttggatagagcttctatt
ccaagcttgtttagttatgaagaaattgtagatgaacttatttctgagattcctgagatt
aaagaagttcctgagcagattagcaagttctggcaaagtagtgtagaccaaaaaaatgca
ttggcaccagctgggaaacatatgctgatggttgaagagccatggattagtaaagactcc
tgtcttcctgatattttagatgaacaggggaattcagctaagtttcaagatgacagtagt
ttgagagaaagtgtttggagaaagcgcccaaagggcaattcagagaccccctgctgcgtg
gagaatgctacgagagaagatatggaaattacgtttttgggtacgggttcttcccagcct
tcaaaatatcgaaatgttagttccatatatattaacctgtttgcacgaggaggtatgctt
cttgattgtggtgaaggaacgttaggacagctgaaaaggaggtttggtgtaagtggtgct
gatgaagctgtaaaaaacttgaggtgcatctggatttcccatattcacgctgatcaccac
acgggtctcgctagagttcttgccttgaggtcaaaattgctaaacggtgttcctcacaaa
cccttgctcgtgattggaccaaaacaactcctgagatttctaaatgcatattcaacactt
gaagatcttgatatgcagttcctagactgcagacaaactttgaagcctagtgttgaggaa
cttcttggtgataatgccaccgaatcggcaacaactcaacttgaaaataccatgtttgcc
cctggaagcagaatggagaactacaacaagaagccttcaagtctgaaggatactacagct
ctcgctaatttgaaagaagttctacatgaatcaggtttggagattctgtacagtgtccct
gtcgtacattgtgcacaggcgtttggagttgttttgagagccaaggagaaggtgagtagt
gctgggaaggcaattccaggatggaaggttgtatattcaggcgacacgcggccgtgccca
gctcttgtagatgcgtccagagatgccaccgtgctgatacatgaggcgacgtttgaggat
agcatgaaggacgaagcgatcgcgcggaaccacagcacaacgaaggaagccatagcagta
ggcacatcggctggagcgtaccgcataatcctgacccactttagccagagatatcctaaa
atcccggtctttgacgaggatgacatgcacaagacctgcatcgctttcgacctcatgagc
gtaaacctcgccgatttgcccgtgctaccaaaggtcctgcctcacctgaagctcctcttc
aaggatgagatggtcgtcgaagagtctgatgaggctttgcggttgattaaatatgctgtt
ggaaaatctggcacggatttcaagcgggaaatgcaacgacactcagcggctatgcgtcag
cttgttcattacaaaggacaccctgaccccttaaaaggggatgcccttaataaggctgtc
cgcgaaactgcaaacgaggccattgctgctattttctccactgaggaccctaaagcagtt
gttgtgacagaaggtctaggcaagcgcatacagggctttggaaacactaattatgagcca
tcaagagatgacaagaagtctttcctcagcgaactaagtgaagtagtgggcattggtggt
gcttccattaaacagggtttgagcaactttgctgccacacattcaatgatgccaaatgat
aatggtggtatgtacaagaacccaattcgcaggtctctgaccacagaaactgatagatat
ggcaggtacgatccaagtgaaattcaaggtgagagccgtgctacatctggtgcttcaaag
aatgtgagttctggttcttggggtccaagtccctcaagttcagcatcagccggtgatact
gaatcaagtcaaccaggaattaagattcgtgaggagagacttttggaaacaattgttact
gcaagcggtgtgcggttgcaacccactcgagatgctctgcagatatttttaacagaagcc
tccaaactggatgcagttgctttgagccgtgcccttgagagcaaactgaactctccattg
tggcaggttcgcatgaaggctatctgtgtactggaagcggttgtaaggaaacaggatact
gatccttattccattgttgcttcatatttcagtgagaacagtgcttctgttgtcagatgt
tgtgaactgccacaagtttctctcagagaaaaggcttcaaaagtattaaatctgctggtt
ggggaacaacctaccggaagcaaacatctttcagaatcaagaactacacccactcctgtt
cagatgcctgatttgattgatacaggggatcaggatgatctagtaactcagagttcagct
caagaaagcagcgagcagatanatgggaacagtaattatgcttcttcagttgatgatttg
cttggtggtgaaactattggtaataccagtggcactagcaatggtaatggaagtgatctg
tttgcagatgtatcattccatgaggaagagattaaggagactaatgacctattctcaggc
atgacagtagaggaaaaatcctcagcccccgtgcatgataactctctgatcgagcaagat
atatttggcagcagcccggagccattgttccaagaaagagttgatgacaaaggaactgtc
aatgatttaatggctggtttgaaccttaatggcactacccaagctcagcctggactaaaa
gcagaaactaacagtaatctcaatggttcacagttctttgacatgaacagtcagaatagc
catgtggcaagtggtgcagcactaaatggtatccttggtcaaagctccttctatcaacag
gttcctatgcagtacaacttgtcaccacaaatgtttggtcaatcatttgctgggcagcaa
ttaaactatggtgctatggaagctcttcttgctcagcagcagcagttactacagaacttg
ggaaatttcaatgctggacttgggcatcctgctttcaattcaatgagtggcggaaatgca
tctgggatgccagatattttcaattcaagtaatcaacctccacatcaagtagctttgatg
agcaattctaagaaagatgaaactaaagcttttgattttgtctcggatcaccttgcagca
gctcgtggttcaaagaagtag
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integrated database retrieval system
