Triticum urartu (red wild einkorn wheat): 125543632
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Entry
125543632 CDS
T08232
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit C-like
KO
K07466
replication factor A1
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03030
DNA replication
tua03420
Nucleotide excision repair
tua03430
Mismatch repair
tua03440
Homologous recombination
tua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125543632
03420 Nucleotide excision repair
125543632
03430 Mismatch repair
125543632
03440 Homologous recombination
125543632
03460 Fanconi anemia pathway
125543632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tua03000
]
125543632
03032 DNA replication proteins [BR:
tua03032
]
125543632
03400 DNA repair and recombination proteins [BR:
tua03400
]
125543632
Transcription factors [BR:
tua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125543632
DNA replication proteins [BR:
tua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
125543632
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
125543632
MMR (mismatch excision repair)
125543632
DSBR (double strand breaks repair)
HR (homologous recombination)
125543632
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
zf-CCHC
REPA_OB_2
Rep-A_N
zf-CCHC_2
tRNA_anti-codon
zf-CCHC_5
zf-CCHC_3
DUF223
CDC24_OB3
AIR2-like_ZnK4
CORD_N
NKWYS
RMI1_C
Motif
Other DBs
NCBI-GeneID:
125543632
NCBI-ProteinID:
XP_048563002
LinkDB
All DBs
Position
1:19344053..19348854
Genome browser
AA seq
1027 aa
AA seq
DB search
MDGAPRLTAGAVREIWELPDGPGTIQPVLQVADLRAVTTKNPVGHQSERYRMLLSDGVHS
QQSMLSTNHNHLVKTGALRQGSIVHLQDITCNTIQNRRIIIVVELDVLLSECDLIGKPKI
YDKSLPAGQVPNLPASAAQANSGNHSNGPGMLGNGVAPRVEQSTNNQSYGGPYNGVHSPA
DPSIGRTLQPGPNNVSSGGSYGTMPAQNTMNGGNMAQPNSQRPYNGVHSPVGPSIGRTVQ
PGPNNVSPGGSYGAMSAQNTMNGNMVQPNSQRPLVNSHQNQRFAVPGAGGGISPPGNVYG
RPAQPSYQQPPPVYTNSGPAAKNGAALRTVPISALNPYQRTWTIKARVAAKSQVKHYNNA
RGPGKLFNFDLRDAHGGEIRAVCFNTQLDQFYDLIEVDKVYLISRGSLKPANKQFNHLNN
DYEVTLDGATTIEVCSDDDSSIPRQQFDFRQISEIANMDKDTMVDLLGVVTSVSPSSPFT
RKDGVETQKRVLQLRDMSGCSVEITFWGGFCNAEGQQLQSLCDSGSNPVLALRSVRVGEF
KGRNVSTIGSSFLKINPDFPAAESLRQWYITEGNNAACTSLSMGGSGMGRTDDRKTVEQI
KAENLGRSEKPDWITVKGAISHISTDNFCYPACTTEVNGTRCNKKVTNNGDGMWQCDKCE
QSTPNCEYRYMLQCQIQDYTGTSYATAFHDAGKDIIGLPAQDLYRIKHEEQDDEKFADII
QKVRFELFLFKLKVKEEVFNDEPRVKCYIVNAQKLEDTSKESRFLLGPIDSLLVDDGLGP
TPGVSGAAAVNTGFTSSTGTYSTNMSGPNQFGQRTSSSSMVPATPSATRYSQNCSVCGST
GHSVQNCPAVAMDMQQPAASGYAASSYGSSPGDAGSGLCFKCNQPGHFSRDCPQQEATSY
RSPAANANANSGLCYKCNQPGHFSRDCPGQAANSYGASAGGNTGAGGLCFKCNQPGHFSR
DCPGQAANSYGASAGGNAGAAGLCYKCNQPGHFARDCQAQAAAPQRQAYGNGAASGGYNR
QSYVGSF
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggatggggcgccgcggctgacggcgggggcggtgagggagatatgggagctgccggac
gggccggggaccatccagccggtgctgcaggtggcggacctgcgcgccgtcaccaccaag
aaccccgtcggccaccagtcggagcgctaccgcatgctgctctccgacggcgtccactcc
cagcagtccatgctctccaccaaccacaaccacctcgtcaagaccggcgccctccgccag
ggctccatcgtccacctccaggacatcacctgcaacaccatccagaaccgcaggatcatt
attgttgtcgaacttgatgttctgctaagtgagtgtgatttgatcgggaagccaaagatt
tatgacaagagcttacctgcgggacaggtgcctaacttaccagccagtgctgctcaagca
aatagtggaaaccattccaatggtccaggcatgcttggcaatggtgtagccccaagggtg
gagcagagtactaacaatcagtcgtatggtggaccctacaatggtgttcacagcccagcg
gacccttctattggccggacactccaacctggacctaacaatgtgtcgtctggtggatct
tatggtacaatgccagcacagaacacaatgaatggcggcaatatggcgcagccaaactct
cagcggccttacaatggtgttcacagcccagtgggcccttctattggtcggacagtccaa
cctggacctaacaatgtgtcgcctggtggatcttatggtgcaatgtcagcgcagaacaca
atgaatggcaatatggtgcagccaaactcccagcgtcctttagtgaactctcatcaaaac
caaagatttgcagttcctggcgcaggtgggggcataagcccccctggcaatgtttatggg
cgacccgctcagccttcgtatcagcagccacctccagtttatacaaatagtggcccagct
gctaagaacggagctgcccttcgcaccgtcccgatttctgcactcaacccttaccaacgt
acatggacaataaaggctagggtggctgccaagagtcaggtcaagcactacaacaatgca
agaggtccaggcaaactcttcaactttgatctccgtgatgcacatggtggagaaattcgt
gcagtatgctttaatacacagttggatcagttctatgacctgattgaggttgataaagtg
tacttgatatctagagggtcgctgaaacctgcaaataagcagtttaaccatttgaacaat
gactacgaagtcactctggatggtgcaacaaccatagaagtttgttctgatgatgatagc
agcatccctaggcagcagtttgatttccgacagatcagcgaaatagctaacatggataaa
gacaccatggtggatttgcttggggttgttacatcagttagcccttcttctccatttaca
cggaaggatggtgtggaaacccagaaaagagtccttcaactgagggacatgtctggttgc
agtgtggaaataaccttttggggtggcttctgtaatgctgaaggacagcagctgcagtcg
ctgtgtgattctggttcaaatcctgtgcttgccctgagatctgtccgtgttggtgaattc
aagggcagaaatgtaagcacaattggctcaagcttcttaaaaataaatccagacttccct
gctgccgaaagtctgaggcagtggtacataactgaagggaacaacgctgcttgcacttct
ttatctatgggagggtcaggcatgggccggactgatgaccgaaaaactgttgagcagatc
aaggctgaaaacttggggagatcagagaagcctgattggatcactgttaagggtgcaatt
tcacacatcagcaccgacaacttctgttacccagcttgcaccacggaggttaatggtaca
cgctgcaacaaaaaggtcacgaataatggcgatggtatgtggcaatgtgacaaatgtgag
cagagcactccaaattgcgagtataggtacatgctccagtgtcaaatccaggattatacc
gggaccagctatgcaaccgcattccatgacgctggcaaggatataattggcctcccagca
caagatctgtacaggataaaacatgaagagcaagatgatgagaaattcgcagacatcata
cagaaggtccgttttgagctattccttttcaagctgaaagtcaaggaagaagtgtttaat
gatgaacctcgggtgaaatgctacattgttaatgctcagaaattggaggacacgtcgaaa
gagtctcgctttctactgggaccaattgatagccttttggtggacgatggcttaggtcca
acccctggggtgagtggtgctgctgctgtcaacactggtttcacctccagcactggtacc
tacagcacgaatatgagtggcccaaatcagtttgggcagcgaacgagctcatctagcatg
gtgcctgccacaccatcagcgacacgatattcacagaactgcagtgtttgtgggtccact
gggcatagtgtgcagaactgccctgcagtggccatggatatgcagcaaccagcagcaagc
ggctacgcggctagttcctatggctcttcacctggtgatgccggctcgggtctgtgcttc
aaatgcaaccagcccgggcacttctccagagactgtccacagcaggaggctacctcctac
aggtctccagccgccaacgccaatgccaactcgggtctgtgctacaaatgcaatcagcct
gggcacttctccagagactgcccagggcaggcggctaactcctatggcgcctcagctggt
ggcaacaccggcgcaggtggcctgtgcttcaaatgcaatcagcctgggcacttctccaga
gactgcccagggcaggcggctaactcctatggggcctcagctggtggcaacgccggcgca
gctggcctgtgctacaagtgtaaccagcctgggcactttgccagagactgtcaggcgcag
gctgctgctccccagcgccaggcttacgggaacggtgccgcatcaggagggtacaaccgg
cagtcctatgttggtagcttctga
DBGET
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