Triticum urartu (red wild einkorn wheat): 125544505
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Entry
125544505 CDS
T08232
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB1-like isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03022
Basal transcription factors
tua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125544505
09124 Replication and repair
03420 Nucleotide excision repair
125544505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125544505
03400 DNA repair and recombination proteins [BR:
tua03400
]
125544505
Enzymes [BR:
tua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125544505
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125544505
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125544505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
125544505
NCBI-ProteinID:
XP_048564177
LinkDB
All DBs
Position
3:complement(485825246..485832866)
Genome browser
AA seq
794 aa
AA seq
DB search
MAGGDGDRARAPKRYKSSAPSKAALVDETAEMNYADDFDDDARDGDNEVKKRDFTKLELK
PDHVNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVS
VGLETTTIISVLSKLSKTKLPHEIIDFIHGSTANYGKVKLVLKKNQYFVESPFPEVVSFF
LQLNNLDYSVTRYLLIYLSCDACVQVLKTLLNDDVISKARKAPEDCLGASSFAVSKTAGE
IASGHDLLDGIELAAATEDKETHSFEIDSNQVENVKQRCLPNALNFPMLEEYDFRNDTVN
PDLDMELKPQARPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLC
LATNAVSVDQWAFQFKLWSTIRDEHISRFTSDNKEKFRGMAGVVVTTYNMVAFGGKRSED
SEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNF
LIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQVLYVMNPNKF
RACEFLIRFHEQQRGDKIIVFADNLFALTAYAMKLRKPMIYGATSHAERTRILYQFKNSP
EVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQDRMAGGKEE
YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPEEGPNLSFHTLDEQLDLL
GKVLSAGDDMIGVEHLEEDSDGKALLKARRSAGLMSAFSGAGGMVYMEYNTGKGKGAKKK
DPAKRHTLFKKRYT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggcgatggtgaccgcgcccgtgcgccgaagcggtacaagtcctcggcgcca
tcgaaggcggccctggtggacgagaccgccgagatgaactacgccgacgacttcgacgac
gatgcccgcgacggagataacgaggtgaagaagagggacttcaccaagctggagctcaag
ccggatcacgtgaaccggccgctgtgggcgtgcgcagacggccgcatcttcctcgagacc
ttctcccctctctacaagcaggcctacgatttcctcatcgccatcgccgaacctgtatgc
aggccagaatctatgcatgaatacaatctaacgccacactcattgtatgccgcggtctca
gttggacttgagacaaccactatcattagtgtcttgagtaagctctccaagactaagtta
cctcatgagataattgatttcatccatgggtcaactgcgaattatggcaaagtaaagctt
gttctgaagaagaatcaatattttgtggagtcgccgttccctgaggttgtatcattcttc
ctgcaactaaataatttggattactctgtcactcgttatttacttatttatttgagctgt
gatgcttgtgtccaggttttgaagaccctcctgaacgatgacgtaatttcgaaagcacga
aaagctcccgaggactgtctaggagcatcttcatttgctgttagcaaaacagctggggaa
atagctagtggacatgatttgttagatggaatagagctggcagctgcaactgaagacaag
gaaacacattctttcgaaattgattccaatcaggttgagaacgtaaagcaacggtgctta
ccaaatgcactgaactttcccatgctagaggagtatgattttagaaatgacacagtaaac
ccagatttggatatggaattaaaacctcaagcacggccaaggccgtatcaagaaaagagc
ctcagtaagatgtttgggaatggtagagcaaggtcaggcattattgtgctaccttgtggt
gcgggaaaatccttggtcggtgtatctgcagcatgtcgtattaagaagagctgtctatgc
ttggccacaaatgctgtgtctgttgatcaatgggcattccagttcaagctttggtcaact
ataagagacgaacatatcagtagatttacatcagataacaaagagaaatttcgagggatg
gctggtgttgttgtgactacctataacatggtggcatttgggggcaaacgatccgaagac
tcagagaagattattgaggaaatccggaacagggagtggggtttgctccttatggatgag
gttcacgttgtccctgctcatatgttcagaaaggtcatcagcattacgaagtctcactgc
aagcttggtcttactgctacgctcgtgagagaggatgaacgtatcacagatctaaatttt
ctaattggaccaaagctttatgaagcaaattggttggatttagtgaaaggtggatttatt
gcaaacgtgcaatgtgcagaagtatggtgtcccatgaccaaagagttctttgctgagtat
ttgaaaaaggaaaattcaaaaaagaagcaggtactctatgtgatgaatccaaacaagttc
agggcttgtgagtttctaattcgattccatgagcaacaacgcggggataagatcattgta
tttgctgataatttatttgcactaactgcatacgcaatgaagctccgtaaaccaatgatt
tatggtgccacaagccatgcggagaggacacgaattttgtaccaattcaagaacagtcca
gaagtcaacactgttttcctctctaaggtgggtgataactccattgatatcccagaggca
aatgtcatcattcaaatatcatctcatgctggttcccggcgtcaagaagctcaacggttg
ggacgtattctcagggcaaagggtaagcatcaagataggatggcaggtggaaaagaagaa
tacaatgcctttttctattctcttgtatcaactgacacacaggaaatgtattattcaaca
aaaaggcaacaattccttatcgatcagggatatagtttcaaggtcatcactagcttgccg
ccacctgaagaaggacctaacctgagttttcacacgctcgatgaacagcttgacctttta
ggcaaagtgttgagcgcaggggatgacatgattggtgttgagcacttggaagaggattct
gatggcaaggctctcctgaaggctcggcgctctgctggattgatgagcgcattttctgga
gcgggtggaatggtctacatggagtacaacactggaaagggcaagggagccaagaagaag
gacccggctaagaggcatacactgtttaagaaacgctatacatag
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integrated database retrieval system
