Triticum urartu (red wild einkorn wheat): 125545674
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Entry
125545674 CDS
T08232
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03022
Basal transcription factors
tua03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125545674
09124 Replication and repair
03420 Nucleotide excision repair
125545674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125545674
03400 DNA repair and recombination proteins [BR:
tua03400
]
125545674
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125545674
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125545674
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
125545674
NCBI-ProteinID:
XP_048565652
UniProt:
A0A8R7PW53
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Position
3:647902780..647912633
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AA seq
600 aa
AA seq
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MGTMTIGAKYKTTLRDPGHGGVLRMSEDKLIFTPNDPRSLMKLNVDFRSIKGHKFNKVDG
SKPTPPLLNLSKDSDKGGGYIFEFDNVGNRDLCRDFVARVLGKHQGTVPARTNVPPEKSA
VSTGPEQLSSAEMERRMKLLREDSELQKLHKKFVLGNILQESEFWATRKNLLDDETNKAS
KQKPGFKSAMLADVRPSADGQTNKVTFSLTTEIIHQIFAEKPAVHRAFLDYVPKKLSEKD
FWTKYCRAEYLLRTKNTLAAKAEAADDEELAMFLKNDDILAKEAKLKIKRVDPTLDMEAD
AGDDYIHLPDHGVLRDGSRETTDIDSELARRTLSQDLNRHAAVVLEGRSTDIESTDTKTV
AEALARSKKEPPPSSAADDASHERLVKVARMTEIEDLQAPRSLPYAPLCIKDPREYFDSQ
QANALRPLGSNDGRKARSCSLSTDDAFRHLMDQISSVKMNCPVVQSDVALKVLSELNEGI
SRSRRLNLKNPQDSLLGRLPHRTREELMDHWTAIQELLRHFWSSYPITTTVLSNKVQRLK
EAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQALDAAFYHDQQQKSSKAGTGSKPNGF
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggggaccatgacgatcggtgccaagtacaagaccacgctcagggaccccggccacggc
ggcgtcctccgcatgagtgaagacaagttaatatttacccctaatgatccacgctcacta
atgaagctcaatgttgatttccgaagcatcaaaggccacaagtttaacaaggtagatggc
agcaaaccaacgccgccattattgaatctttcaaaagattctgacaaggggggaggctat
atttttgagtttgacaatgttggtaaccgtgatttgtgtcgcgactttgtagctagggtt
ttaggcaaacatcaaggtactgtgcctgctagaacaaatgtacctccagaaaaatcagct
gtgtcaactggtccagaacagctcagttctgccgaaatggaacggcggatgaaattgctg
cgagaagacagtgaactgcagaagttacataagaagtttgtgcttggcaatattctgcaa
gagtctgaattttgggcaacaagaaagaatttacttgacgatgaaacaaacaaagcatca
aaacaaaagccaggtttcaaaagtgccatgctagctgatgttaggccatcagctgatgga
cagacaaacaaggttactttcagtctgactactgagattatccatcagatttttgcagaa
aagccagccgtgcatcgggcatttttggattatgtcccgaagaagttgtcagaaaaggat
ttttggacaaaatactgtagagctgagtatctacttaggacaaaaaatactttagcggca
aaagctgaagccgctgatgatgaggaattagccatgtttttgaaaaatgatgatatactt
gccaaggaggcaaagctcaagataaaacgagttgatccaacattagacatggaggcagat
gcaggggatgactacatccatcttccggatcatggggttctccgtgatggcagcagagag
acaactgatattgatagcgagttggctaggagaacactttctcaggatctgaatcggcat
gctgctgttgttcttgaagggagatcaacagatattgaatcaactgatacgaagactgtg
gctgaagcacttgcaaggtccaagaaggaaccacctcctagctctgctgctgatgatgct
agtcatgagagattggtaaaggtggcccgcatgactgagatagaggatctgcaagctcca
cgaagtctcccatatgcaccactttgtataaaggatcctcgagaatattttgattctcag
caagcaaatgctctgagacctttaggtagcaacgatggaagaaaggcccgcagctgcagc
ctgagcaccgatgatgcattccgtcatttaatggatcaaatatcttccgtgaaaatgaac
tgtcctgttgttcagtcagatgttgctctaaaggttcttagcgaattgaatgaaggaatt
tcacgttcacggaggcttaatcttaagaatccccaagacagtctccttggtcgtcttcct
caccgaacacgagaggaacttatggatcattggacggctatccaggagttgctgcgccat
ttttggtcatcatacccaataacaaccacagtccttagtaataaggttcaacggctgaag
gaagcaatgacacagatatatcagaagttacaggatataaaggaatcagcacagcctgat
gtacgacatgaaatatctcaactcgtaaagcccatgacacaggcgctggatgctgcattc
taccatgaccagcagcagaaatcttcaaaggccggtaccgggagcaagcccaatgggttt
tga
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