Triticum urartu (red wild einkorn wheat): 125548103
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Entry
125548103 CDS
T08232
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit C-like
KO
K07466
replication factor A1
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03030
DNA replication
tua03420
Nucleotide excision repair
tua03430
Mismatch repair
tua03440
Homologous recombination
tua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125548103
03420 Nucleotide excision repair
125548103
03430 Mismatch repair
125548103
03440 Homologous recombination
125548103
03460 Fanconi anemia pathway
125548103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tua03000
]
125548103
03032 DNA replication proteins [BR:
tua03032
]
125548103
03400 DNA repair and recombination proteins [BR:
tua03400
]
125548103
Transcription factors [BR:
tua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125548103
DNA replication proteins [BR:
tua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
125548103
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
125548103
MMR (mismatch excision repair)
125548103
DSBR (double strand breaks repair)
HR (homologous recombination)
125548103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
zf-CCHC
tRNA_anti-codon
zf-CCHC_2
zf-CCHC_5
DUF936
DUF223
BRCA-2_OB1
CDC24_OB3
RMI1_C
Motif
Other DBs
NCBI-GeneID:
125548103
NCBI-ProteinID:
XP_048567744
LinkDB
All DBs
Position
1:complement(69414800..69423276)
Genome browser
AA seq
880 aa
AA seq
DB search
MEAPPPLTAGAVTEIWELPNGPATFQPVLQVADLRPVVAKNTTAAAAAAQHSERFRMLLS
DGVHSQQSMLGTGLNDLIKDGTLRVGSIVHLTDMTCNTIQKRRIVIVVKLEVLQSECPKI
GTPKIYEKSLPEGQEPNLPANAAQTNSGNYSGPGMLGSAVAPRVEQIGNNLSYGRPNNGG
PGVGSSICQSVQPGANNVLSGGTYGAMSAQNTMNANVVQPNSHQNQSFAVPGTGGGFGPP
GNIYGRPAQPSYQQPPPPHRNSGPVAKNEAASRVIPISALNPYQRTWTIKARVTAKVQVK
NFVNARGPGKVFSFDLLDANGGEIRATCFGAAVDQFYDLIEVDKVYLVSRGSLKPANKRF
SPLNNDYEMNLEPSSSIEVCSGDDSSIPKQQFNFRQISEIANMDKDTTVDLLGVVTSVRP
SFTVMLKNGGETQKRVLQLKDMSGCSVEMTFWGNFCDAEGQQLQSLCDSGLNPILALKSG
RVSEFNGKTVGTTSSSLLKINPDFPEAERLRQWYITEGKIAACTSLSGEMSSMGRTDVRK
KTAQIKDERMGQSEKPDWITVQGAISQIYTDNFCYPACTREVNGKSCNKKVTNSGDGMWL
CERCDQSSETCEYRYLLSCQIQDHTGFTPATSFQEAGQEIIGLSAQDLFRIKHEEQDDVR
FAEIIQQVRFQQYLFKLRVKEEVYNDEPRVKCNIVKAERYDPVKESHFFLGAIDSLLAED
ASGSSPGLNGGPAVNAGFANSEAGQSVPASNNSYAANMGGPNQFGQQFSASRGMPTAPSA
TPAAGSGFAANSYGPSAANASSGLCFKCNQPGHFSRDCPGQAASYSSSVGGNANTGLCFK
CNQPGHFARDCPAQAAGHQRQTYANGAAAGGYNRQSYVGS
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccgccgccgctgacggcgggcgcggtgacggagatatgggagctcccgaac
gggccggcgacgttccagccggtgctgcaggtcgcggaccttcgccccgtcgtcgccaag
aacacgaccgcggcggcggccgcggcgcagcactcggagcggttccgcatgctgctctcc
gacggcgtccactcccagcagtccatgctcggcaccggcctcaacgacctcataaaggac
ggaaccctccgcgtcggctccatcgtccacctcacggacatgacgtgcaacaccatccag
aaacgcaggatcgttattgttgtcaaacttgaagttctccaaagtgagtgccccaaaatt
gggacaccaaagatttatgagaaaagcttacctgagggacaggagcctaacttaccggcc
aatgctgctcaaacaaacagtggaaactattctggcccaggcatgctggggtctgcagtt
gctccaagggtggaacagattggtaacaatctgtcatatggtagacccaacaacggtggc
ccaggcgtgggctcttcaatttgtcagtctgttcaacctggtgctaacaatgtgttgtct
ggtggaacttatggtgcaatgtcagcacaaaacacaatgaatgctaacgtggtgcagcca
aactctcatcaaaaccaaagttttgcggttcctggcacaggtgggggctttggccctcct
ggcaatatatatgggcgccctgcacagccttcatatcagcagccacctccaccccataga
aatagtggcccagttgctaagaatgaagctgcttctcgtgttattccaatttctgcactg
aacccataccaacgtacatggacaataaaggctagggtgactgcgaaggttcaggtcaag
aactttgttaatgcaagaggtcccggaaaagtcttctcctttgatctccttgatgcaaat
ggtggagaaattcgtgcaacatgctttggcgcggcagttgatcagttctatgacttaatt
gaggttgataaggtgtacttggtatccaggggatcgctaaaacctgcaaacaagaggttt
agccctttaaacaatgactatgaaatgaaccttgagccttcatcatctatagaagtttgt
tctggtgatgatagcagcatccctaagcagcagttcaattttcggcagatcagcgaaatt
gcaaacatggataaagataccacggtagacttgcttggtgttgttacttcagttaggcct
tcttttacagtaatgcttaagaatggcggggaaacccagaaaagagttcttcaactgaag
gacatgtctggttgcagtgtggaaatgaccttttggggtaacttctgtgatgctgaaggt
cagcagctgcagtcgctgtgcgattctggtttgaatcctatacttgcgctgaaatctggc
cgagttagtgaattcaacggcaaaacagtgggtacaactagctcaagtttgttaaaaata
aatccagatttcccagaagctgaaaggctgaggcagtggtacataactgaaggaaaaatt
gctgcctgcacttccttatctggggaaatgtcaagcatgggcaggactgatgtccggaaa
aaaactgcacagatcaaggatgaacgcatggggcaatcagaaaagcctgattggatcacc
gttcaaggtgcaatttcacaaatctacactgataatttttgttacccagcatgcaccagg
gaggttaatggtaaaagctgcaacaaaaaggtcacaaatagtggtgatgggatgtggcta
tgtgagagatgcgatcagagctctgaaacgtgcgagtatagatacctgctgtcgtgccag
atccaggatcatactgggttcacccctgcaacttcgttccaagaggctggccaggagata
atcggcctctcagcacaagatcttttcaggataaagcatgaagagcaagacgatgtacgt
ttcgcagaaatcatacagcaggtccgatttcagcaatacctattcaagctgagagtcaag
gaagaagtctataatgatgagccgcgtgtgaagtgcaacattgttaaggctgaaagatac
gacccagtgaaagagagtcatttttttctgggggccattgatagtcttttggcggaggac
gcttcaggctcttcccctgggctgaatggtggtcctgctgttaatgctggcttcgccaac
tcagaagctggacagagtgtgccagcctccaacaattcctatgccgcgaatatgggtggc
ccaaatcagtttgggcagcaattcagcgcatctcgcgggatgccgactgcaccatcagcg
acaccagcagcaggtagtggcttcgcggctaattcctatggtccttcagctgccaatgcc
agctcaggcttgtgtttcaaatgtaaccagcctgggcacttttcaagagactgtccaggg
caggctgcctcctacagttcttcggttggcggcaacgccaacactggtctgtgtttcaaa
tgtaatcagcctgggcacttcgcgagagactgtccggcgcaggctgccggccaccagcgc
cagacgtatgcgaatggcgccgcggcaggaggatacaacaggcaatcctatgttggtagc
taa
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