Triticum urartu (red wild einkorn wheat): 125548170
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Entry
125548170 CDS
T08232
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125548170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125548170
03009 Ribosome biogenesis [BR:
tua03009
]
125548170
04131 Membrane trafficking [BR:
tua04131
]
125548170
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tua04147
]
125548170
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125548170
Ribosome biogenesis [BR:
tua03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
125548170
Membrane trafficking [BR:
tua04131
]
SNARE
SNARE associated proteins
Others
125548170
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125548170
Exosome [BR:
tua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125548170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_33
AAA_14
AAA_22
TIP49
CDC48_2
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
Parvo_NS1
AAA_18
ABC_tran
ATPase_2
IstB_IS21
AAA_7
Viral_helicase1
NB-ARC
NACHT
ResIII
AAA_24
TsaE
Zeta_toxin
Vps4_C
DUF815
Sigma54_activ_2
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
125548170
NCBI-ProteinID:
XP_048567798
LinkDB
All DBs
Position
3:130395797..130398290
Genome browser
AA seq
789 aa
AA seq
DB search
MASAATSKKAANRLVVEEATTNDDNSVCNLHPATMEKLSIFQGDIVLLKGKRRHNTVCMA
LADDTCDGHKLRINKVARSNLRVRITDVVSVHLCHDAKFGKRVHILPLDDTIEGITGNLF
DAYLKPHFVDAFRPVHKGDLFLVRGGMRSVEFKVMEIDPAVDYCFMAPDTEIFCEGEPVK
REDEERLDDVGYDDVGGMGKPLTLIRELVELPLRHPQIFKSIGVKPPKGILLYGPPGSGK
TLIARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP
NREKTHGEVERRIVSQLLTLMDGMKARAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV
PDEVGRLEVLRIHTKNMKLDEDVNLEVVAKDTHGYVGADLAALCTEAALQCIREKMDVID
LEDDTIDAEILNSMAVTNDHLKTALVSTNPSALRETVVEVPNVSWTDIGGLDGVKRELQE
TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW
FGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGRVGDAGGAADRALNQLLTEMDGM
NAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEASRHQIFKACLRKSPVAKDVD
LGALARLTAGFSGADITEICQRACKYAIREDIEKDMERQRKGKDTMEVDGGQEEDEVAEI
KAAHFELSMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFPAQPQAAEAAADNSAAA
DEEEDDLYK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcggcaacgtcgaagaaggcggcgaaccggctggtggtggaggaggccacc
accaacgacgacaactccgtctgcaacctccacccggccaccatggagaagctctccata
ttccagggcgacatcgtgctgctcaagggcaaacgccgccacaacacggtctgcatggca
ctggccgacgacacctgcgatgggcacaagctcaggatcaacaaggtggcccgctccaac
ctgcgcgtgcgcatcaccgatgtcgtgtccgtgcacctgtgtcacgacgccaagttcggc
aagcgcgtgcacatcctccctctggacgacaccatcgagggcatcacggggaacctcttc
gacgcctacctcaagcctcacttcgtggatgccttccgcccggtccacaagggcgacctc
ttcctcgtgcgtggcggcatgcggagcgtcgagttcaaggtcatggagatcgaccctgcg
gtggactactgcttcatggcgcccgacacggagatcttctgcgagggcgagccggtcaag
cgggaggacgaggagaggcttgacgacgtcggctacgacgacgtcggtggcatggggaaa
ccgctgactctgatcagggagctcgtcgagctgccactcaggcatccccagatcttcaag
agcattggcgtcaagcctcccaagggcatcctcctgtacggccctccagggtccggcaag
acgttgatcgcccgtgcggtggccaacgagaccggggccttcttcttccttatcaacggg
ccagagataatgtcgaagatggccggagagagcgagagcaacctgaggaaggccttcgag
gaggccgagaagaacgcgccctccatcatcttcatcgacgagatcgactccattgctccg
aacagggagaagactcacggcgaggtcgagaggcgcatcgtctcccagctgctgactctg
atggacggcatgaaggcccgcgcgcacgtcatcgtcatgggcgccacgaaccgtcccaac
agcatcgaccctgccttgaggcgcttcgggaggttcgatcgcgagatcgacatcggcgtg
ccagacgaggtcgggcgtctcgaagtgctccgcatccacaccaaaaacatgaagctggac
gaggacgtcaaccttgaggtggttgccaaggatacgcacggctacgtcggcgccgacttg
gccgcgctctgcactgaggcggcgctgcagtgcatcagggagaagatggacgtcatcgac
ttagaggatgacaccatcgacgccgagatcttgaactccatggccgtcaccaatgaccac
cttaagacggctctcgtcagcacgaacccgtctgcgctacgtgagaccgtcgtggaggtg
ccgaacgtcagctggaccgatatcggcggcctcgacggcgtcaagagggagctgcaagag
accgttcagtacccggtcgagcacccggagaaattcgagaagttcggtatgtcgccatcc
aagggcgtcctgttctacgggccaccaggctgcggcaagaccttgctggcgaaggctatc
gccaacgagtgccaggccaacttcatcagcatcaaagggccagagctgctcaccatgtgg
ttcggcgagagcgaggccaacgtgcgcgagatcttcgacaaggcacgtcagtctgcgccg
tgcgtgctgttcttcgacgagctcgactccatcgctacccaaaggggcggcagagtgggc
gacgccggcggcgcggcggacagggccctgaaccagctgctcaccgagatggacggcatg
aacgccaagaagacggtcttcatcatcggcgccaccaataggcctgacattattgactcg
gcattactccgtcctggccgtctggaccaactcatctacatccccttgccggacgaggcc
tcgcggcatcaaatctttaaggcctgcctcaggaagtctcccgtggccaaggacgttgac
ctcggtgctctcgcaaggctcaccgctggctttagcggtgccgacatcacggagatttgc
cagagggcgtgcaagtacgccatcagagaagacattgaaaaggacatggagcggcagagg
aaggggaaagacaccatggaagtggacggcgggcaggaagaggacgaggtggctgagata
aaggcggctcacttcgagttgtcgatgaagtatgcgaggcggagcgtgagcgacgccgac
atcaggaagtaccaggcctttgcgcagacgctgcaacagtctagggggttcggcactgag
ttccgctttccggcgcagccacaggcggcagaagctgctgcagacaactccgcggcagct
gatgaggaggaagatgatctgtacaagtga
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