Triticum urartu (red wild einkorn wheat): 125548789
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Entry
125548789 CDS
T08232
Name
(RefSeq) probable pectate lyase 4 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua00040
Pentose and glucuronate interconversions
tua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125548789
Enzymes [BR:
tua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125548789
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125548789
NCBI-ProteinID:
XP_048568287
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Position
3:594286279..594287778
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AA seq
395 aa
AA seq
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MVDITPPHPDEHFGGEPAVEDTAPPRFSDEQQLGCVPQTTLMPYAAVDSSLRAMAGQAEG
FGRHAIGGLHGDVYHVTTLNGTHAERCIIKDDGPGSLRDGCRRQEPLWIVFDVSGTIRLA
SGLRVSSHKTVDGRGRRVTLSGKGLLLRECEHVILCNLEVEGGRGHDADAVQIKPGSRHV
WVDRCSLRDFADGLLDVTCGSTDVTVSRCRFSAHDKAVLIGASSGHVGDRRIRVTIHHCL
FDGTRQRQPRVRFGRVHLYNNYTRGWGIYAVCASVESQIVSQCNIYEAGEKKKVFTYMSE
QAADRDCSSSGRIRSEGDLFLNGAQEYTENDLETAEDDQWDFEVRDCYKPWSVQPASMAL
KELLESCTGWQPVPLPEDVCFTRAPAAAAAATTSV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggtggacattactcctcctcaccccgacgagcatttcggtggtgagccggccgtggaa
gacaccgcccctcctcgattctccgacgagcaacaactcgggtgcgtgccgcaaaccacg
ctgatgccgtacgcggccgtggactcgtcgctgcgcgccatggccggccaggccgagggc
ttcggccggcacgccatcggcggcctccacggcgacgtctaccacgtcaccaccctcaat
ggtacgcacgctgaacgatgtattattaaagacgacgggcccggctcgctgcgggacggc
tgccggcgccaggagccgctgtggatcgtcttcgacgtgtccggcaccatccgcctcgcg
tcggggctgcgcgtgtcgtcccacaagaccgtggacggccgcgggcggcgcgtcaccctg
tccggcaaggggcttcttctccgcgagtgcgagcacgtgatcctgtgcaacctggaggtg
gagggcgggcgcgggcacgacgccgacgccgtccagatcaagcccgggtccaggcacgtg
tgggtggaccgctgcagcctgcgcgacttcgccgacggcctgctggacgtgacctgcggc
agcacggacgtgaccgtctcccggtgccgcttctcggcgcacgacaaggccgtgctgatc
ggcgccagcagcggccacgtcggggaccggcgcatccgggtgaccatccaccactgcctc
ttcgacggcacgcggcagcggcagccccgcgtccggttcggccgggtgcacctctacaac
aactacacccggggctggggcatctacgccgtctgcgccagcgtggagtcgcagattgtc
tcccagtgcaacatctacgaggcaggggagaagaagaaagtgttcacgtacatgagcgaa
caggcggcggacagagactgcagctcaagtgggcgcatccggtctgaaggcgacctgttc
ctgaacggcgcgcaggagtacaccgaaaatgatttggaaactgcagaagacgaccagtgg
gacttcgaggtccgggattgctacaagccgtggtcggtccagcccgcgtcgatggcgctc
aaggagctcctcgagtcctgcaccggctggcagccggttccgctgccggaagacgtctgc
ttcacaagagcacctgctgctgctgctgctgctacgacatctgtctga
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