Triticum urartu (red wild einkorn wheat): 125550183
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Entry
125550183 CDS
T08232
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125550183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125550183
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125550183
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125550183
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Peptidase_M9_N
DUF5646
Motif
Other DBs
NCBI-GeneID:
125550183
NCBI-ProteinID:
XP_048569072
UniProt:
A0A8R7Q218
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Position
4:7441981..7449854
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AA seq
884 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKQIEREMERFKVCEKETKTKAFSKEGLGQQPK
TDPREKAKAETRDWLNSVVSDLENQIDNFEAELEGLSFKKGKQRPPRLVHLEKSITRHKA
HIKKLESILRLLDNDELSPEQVNDVKDFLEDYVERNQEDFDEFSDVEDLYSTLPMEKVEA
LEDMVSLAPSILIKGVAAVSTTAVLSTKSPTATSPTQATVSTISQGTSQDQAEETTTLES
NPESVPQTPPPKGGNLGPSVPVVPTAISTSAAAVSVSADAISSPGPVRPIVPPTAPTIFA
ASAAVRNATESMPAVASTPANLSTAVKDDESMSFPPRRPSPAVTEIGLGRGITRGLTSQA
LAAPISVGPAPGNGSITAIPPINDLSKRNIMNTDERVNTGGLSQQLVSPLGSKVQPQPVV
KTNDAVSSDSSNTSESAVIGGRVFSPPVVPGAQWRPQAPAGFQNQSETGQFRGRPEVTDQ
REKYLQRLQQVQQQQGNLLNASHITGINQKQFSTQQPNSLLQQFNSQSSSISSQGGLGLG
VQGPGIPSAFSSQLQPHESQILEQYAGQTKSDEQQQGLADDASVESAATTGPNKHTNEDD
TKAPYSNPPASIAEGTQLSRDSDLSPGQPMQAGMPSSGVGVIGRRSVSDFGAIGDNLSGA
SVVSGHDHLYNLQMLEAAYHRLPQPKDSERAKTYIPRHPSVTPASYPQIQAPIVTNPAFW
ERLGSDTLSTDMLFFAFYYQQNSYQQYLAAKELKKQSWRFHRKYNTWFQRHVEPQVTTDE
YERGSYVYFDFHLADDGNGWCQRIKNDFTFEYNFLEDELSVQPN
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgggggccagtcggaagctgcagggcgagatcgaccgcgtcctcaagaaggtgcaggag
ggcgtcgacgtcttcgacagcatctggaacaaggtctacgacaccgagaatgcgaaccag
aaggagaagttcgaggcggacctcaagaaggagatcaagaagctgcagcgctaccgcgac
cagatcaagacctggatccagtccagcgagatcaaggacaagaaggttagtgcctcttat
gagcaggctctcatggatgcccgcaagcagattgaacgcgagatggaacgatttaaggtc
tgtgagaaggaaactaaaaccaaggccttctcgaaagaagggttaggtcaacagcctaaa
actgatcctagagagaaggctaaagctgaaacaagagattggcttaacagtgtggttagt
gatttggaaaatcagattgataattttgaagcggagcttgaaggactttcatttaagaaa
ggaaagcaaagacctcctcgattggtacatttagagaaatctattacgcggcataaggct
catataaaaaaattggagtcaattctgagactcttggataatgatgagttgagtcctgag
caagtcaatgatgtgaaagatttcctagaagactatgttgaacgtaatcaggaagatttt
gatgaatttagtgatgttgaggatctctatagcacattgcctatggagaaggttgaagca
ctcgaagacatggtttcacttgctccttccattcttatcaagggtgttgctgctgtttcc
actactgcagttttgagtacgaagagtccgacagcaacttcacctactcaggctactgta
tcaacaatctcacaagggacatcacaagatcaagcagaggaaacaactacgctagaaagc
aatcctgaatcggtgccacaaacaccacctccgaagggtggaaatctgggaccatcagtg
ccagttgtgcccactgccattagtaccagtgctgcagctgtttctgtttcggcggatgcc
attagttccccaggcccagtacggccaattgttcctcccacagcacccacaatatttgct
gcttctgctgctgttcgaaatgctacagagagcatgcctgctgttgcttcaactcctgca
aacttatctactgccgtgaaggatgatgaaagcatgagctttcctccacgtagaccgtct
cccgcagttactgaaattggtcttggcaggggtattacccgtggcttaactagtcaggca
ttagctgctcccataagtgtaggtccagctccaggaaatgggtccattactgcaattcct
ccaataaatgacctgtccaaacgaaacataatgaatactgatgagagggttaacactggt
ggtctttctcagcagttggtttcacctcttggtagtaaagttcaaccacagccggttgtg
aagactaacgatgctgttagctctgattccagtaacaccagtgaaagtgcagttattgga
ggaagggtattttctcctccggttgttcctggggctcagtggaggcctcaagctcctgct
ggtttccaaaatcaaagtgaaactggtcaatttcgtggaagacctgaggtcaccgaccaa
agggagaagtacttgcaaagattgcaacaagtacagcagcagcagggcaaccttcttaat
gcttctcatataacgggcatcaatcagaagcaattttcaacccagcagcccaattccctc
ttacaacagtttaattctcagagttcttctatctcttctcaagggggccttgggctaggg
gttcagggaccaggtatcccttctgccttctcatctcagctacaacctcatgaatcccaa
attctcgagcaatacgctgggcaaacaaaaagtgacgagcagcaacaaggcttggccgat
gatgctagtgtggagtctgctgcaacaactggaccgaataagcacaccaatgaagatgac
acaaaggctccttattcgaatcctccagcatccatagcagaaggcacccagctatctaga
gactctgatctatcacccgggcagcctatgcaagctggcatgccatcatctggtgttggt
gttattggccggaggagtgtatctgattttggagcaattggagacaatctcagtggagct
tcggtagtttctggtcacgatcacctttataatttgcaaatgctcgaagctgcataccac
aggcttccacagcccaaggactctgagcgtgcgaaaacttatattccgaggcacccttca
gtgacccctgccagttacccacagattcaggcaccaattgtgacaaatcctgctttttgg
gaaaggctcggtagtgatacattgtctacagatatgttattctttgcattctactatcag
cagaactcgtaccaacaatatttggccgcgaaagaactaaaaaagcagtcatggagattt
cacaggaagtacaatacttggttccagcggcacgtggagccacaggtgacgacggatgag
tatgagcggggatcatatgtgtactttgattttcatctcgcagatgacggcaatgggtgg
tgccaaaggatcaagaacgacttcacatttgagtacaacttccttgaggatgaactgtca
gtacagccaaactag
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