Triticum urartu (red wild einkorn wheat): 125550631
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Entry
125550631 CDS
T08232
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125550631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tua03041
]
125550631
Enzymes [BR:
tua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125550631
Spliceosome [BR:
tua03041
]
Complex C
Other components
Step II factors
125550631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
AAA_19
AAA_30
ATPase_2
ABC_tran
Helicase_RecD
AAA_16
NPHP3_N
SLFN-g3_helicase
T2SSE
Dynamin_N
nSTAND3
Flavi_DEAD
AAA_18
SRP54
Cas3-like_C_2
AAA_33
FtsK_SpoIIIE
AAA_29
Motif
Other DBs
NCBI-GeneID:
125550631
NCBI-ProteinID:
XP_048569619
UniProt:
A0A8R7Q2G9
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All DBs
Position
4:complement(56588702..56601450)
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AA seq
705 aa
AA seq
DB search
MPSPSPSRPPVLPISEHEDEIVAAVEANPVIVVIGETGSGKSTQLSQILHRRGYTRRGAI
AVTQPRRVAAVSVSRRVAQELGVSIGEEVGYAIRFEDRTSEKTKIKYLTDGVLLRESLSN
PELKQYSVIILDEAHERSLNTDILLGLMKRLIKHRASDLKVLITSATLDGLKVSNFFSGC
PVLNIPGTIFPVEKFYRTDRPTNYIESSLRTAIDIHVKEAPGDVLIFMTGKDDIDKMVSK
LEERIQNLEEGSCMDALVLPLHGSLPPEQQVRVFSPAPPNCRRFIVATNVAETSLTVDGV
VFVVDCGYVKQRQYNPSTGMYSLDVVEISRVQADQRAGRAGRTRPGKCYRLYPSSIYQKE
FLEATIPEIQRTSLAGSVLYLKSLNLPDIDILKFDFLDPPSRESLEDALRQLYLIDAIDE
SGQITDVGRLMAELPLDPSLSRTLIEANELGCLSQALTVAAVLSAEITLRQTRSKDMEGK
RKRQELPDGSGWGDHVQLLQIFESWDQADYDPRWCSDHDLQVRGMKFSKDVRNQLSQIIQ
KIAKGPTDLQARRGQKSDPDYRKLRRALCVGYGNQLAERMIHHNGYHTVGYRTQLVQVHP
SSVLEGDEYGKLPVYVVYHELINTTRPFMRNVCGVEQTWVKPILKKLEKLNINKLSGGSS
ALIDYEPLEEKQPGSPTKAAAAKQSDVDSKIQAARERYLARKGKK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgccgtcgccgtcgcggccgccggtgctgccaatctcggagcacgaggacgag
atcgtggccgccgtggaggcgaacccggtgatcgtggtcatcggcgagaccggctccggc
aagagcacccagctctcccagatcctccaccgtcgaggctacacccgccgcggtgctatt
gcggtcacccagccccgccgtgtcgcggccgtctccgtctccaggagggtggcacaagag
ctcggtgtctccattggggaagaagttggttatgctattcggtttgaagaccgaacttca
gaaaagactaagatcaagtacctcacagatggtgttcttctgcgggaaagcctttcaaat
cctgagttgaagcaatactcagtaattatcttggacgaagctcatgaacgtagcttgaac
actgatatccttttaggtttaatgaaaagattgatcaaacatcgagcttcagatttgaaa
gttctcatcacttcggcgactctcgatggtttgaaagtgtcaaatttcttctctggatgt
cctgtgttgaacatccctggaactatattccctgtggagaagttttacagaacagatcgt
ccaacaaattatattgaatcttctctcagaacagctatagatatacatgttaaggaagct
cctggggatgtattaatatttatgacaggaaaggatgacatcgacaagatggtgtcaaaa
ttggaggaaagaattcaaaatcttgaggaaggatcttgtatggatgctcttgtcctacca
ctccatggttctttgccacctgaacagcaggttcgggtattctctccagcacctccaaat
tgtcgacggttcattgttgcaacaaatgtagctgaaacttcgttaactgtagatggtgtt
gtgtttgttgttgattgtggttatgtaaagcaacgccagtataatccgtcaactggaatg
tattcacttgatgtagttgagattagcagagtgcaagctgaccagcgagctggacgagct
ggaagaactcggcctggcaagtgttatagattatacccaagttccatctaccaaaaggag
tttctcgaggctacaattccagaaattcaacgaacctcccttgctggaagtgttctgtat
ctgaaatcattaaatcttcctgatatcgacattctaaagtttgatttccttgacccacca
tcacgtgaatcattagaagatgctttgaggcagttatacctcattgatgcaattgatgaa
agtgggcaaataacagatgttggacgccttatggcagagctccctcttgacccttcgctt
tcaaggactttgattgaagctaatgaactgggatgtctgtctcaggcattaactgttgct
gcagtcttgtccgctgaaatcacactgcggcaaactagaagcaaggatatggaaggaaag
agaaaacgacaagagctccctgatggttctggctggggtgaccatgtacaattgcttcaa
atatttgaaagctgggatcaagcagactatgatccaagatggtgctcagatcatgattta
caggtacggggcatgaaattcagcaaagatgtgagaaatcaattaagtcagattattcaa
aaaattgctaaaggtccaacagatttgcaagcaaggagaggacagaagagtgaccctgac
tacagaaaattgaggagagcactttgtgtaggatatggcaaccagttagctgagaggatg
attcatcataatggttaccatacggttggatacaggacacaacttgtgcaggtgcatcca
tcttctgtactggaaggggatgaatacgggaaactgcctgtgtatgtcgtctaccacgaa
ctaataaatactacccgccctttcatgagaaatgtttgtggggtcgagcagacttgggtt
aaaccaatcttgaagaagcttgagaaactgaacataaacaaattaagcggcggttcaagt
gcgttgatagattacgaacctctagaggagaagcaaccaggctcgccgacaaaagctgca
gctgctaagcaatctgatgtggatagtaaaatccaggcggcccgagagcgctaccttgcg
cgaaaaggcaagaagtga
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