Triticum urartu (red wild einkorn wheat): 125550815
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Entry
125550815 CDS
T08232
Name
(RefSeq) cleavage stimulating factor 64-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125550815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125550815
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
125550815
U7-dependent histone pre-mRNA processing factors
125550815
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RrnaAD
RRM_7
Motif
Other DBs
NCBI-GeneID:
125550815
NCBI-ProteinID:
XP_048569870
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Position
4:complement(86407159..86412846)
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AA seq
489 aa
AA seq
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MAAAPAGPQNRCVFVGNIPYDATEELLVQICEEVGPVVSFRLVVDKETGKPKGYGFCEYK
DEETALSARRNLQGHDVNGRQLRVDFAENGRNTDRNREKGRGGPGMSSTVDAQKQLTTTP
AVGDTSLHQLIGLPPAIHAASVMAGVLGGAQTANVQNGLPVQFGLGNDPLTHYLARMSRH
QLYEIMSELKTLTTQNNDLAKKLLQGIPQLPKALFQAQIMLGLVTPQMMQMAKSQQPSSS
LAQSSHLNESFPQPDDVLPIVHKPPPNPNVMQEQTALLHNFPQYQHSSQPPVKMFPHGHQ
SGVLAHPPMLPQPFGTSSSVPTQPLVTSGGLISQVQPSFLTQHPRPPVMPTNVQQLPLTN
PHLPQVAAEPEIFPKEIRLPDRASHQAELDHPSKLRKLEDGTLTPGIVNNSPAIYTAPSQ
VIPTGPSGSYSSGAVNFQQPENEAPQLTQDDESALLQQVLQLTPEQLSSLPVEQQQQVIQ
LQKMLSAGK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcccccgcgggcccccagaaccgctgcgtcttcgttgggaacattccatac
gatgcgacagaggagctgctcgtgcagatatgcgaggaagtcgggcccgtggtctccttc
agactggttgttgataaggaaactggaaagccgaaaggttatggattttgtgaatacaag
gatgaagagacagctctaagtgcacgccggaaccttcagggtcatgatgttaatggtcgt
cagttacgtgttgattttgctgaaaatgggaggaacactgacagaaatagagaaaagggt
cgtggaggaccaggaatgtcatctactgttgatgctcagaaacaattaaccacaactccc
gctgtaggggacaccagccttcatcagcttattggtcttccaccggcaatacatgctgca
tctgtgatggctggcgttcttgggggagctcaaactgcaaatgtacaaaatggtttacct
gtccaatttgggcttggaaatgaccctcttacccattacttggccaggatgtcaaggcat
cagttgtatgaaatcatgtctgagttgaagaccctaactactcaaaataacgaccttgcc
aaaaaactgctgcaaggaattccacagcttccaaaggccctatttcaggcacagataatg
ctcgggctggtgacacctcagatgatgcagatggctaagagccaacagccttctagttcg
ttggcacaatcttctcacctcaatgaatcatttccgcagccagatgatgtgttaccaatt
gttcataaacctccaccaaaccctaatgtcatgcaggaacaaactgcactgctgcataac
tttcctcagtatcagcattcatctcagcccccagtcaaaatgtttccgcatggacatcag
tctggggtgctggcacaccctccaatgctacctcagcccttcggcacctcttccagtgtt
cctactcaaccccttgtaacctcaggaggcttgatatcacaagttcagccttcatttttg
acacagcaccctagaccaccagttatgccaactaatgtacagcaactacccttgaccaat
cctcatctcccccaggttgctgctgaacctgagatatttccgaaggaaataagattgcct
gatcgagctagtcatcaggcagagttagaccatccatcgaaactgagaaaattggaggac
ggaacattgacgccaggaattgtaaacaatagtcctgctatttatactgctccatcgcag
gtcatccctactggaccatcagggagctatagttctggtgctgttaactttcagcaacca
gagaatgaagcgcctcagctcacacaggacgacgagtcagcccttctgcagcaagtctta
caactgacacctgagcagctgagttcattgccagtggagcagcagcagcaggtgatacag
cttcagaagatgctatcagctggtaaatag
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