Triticum urartu (red wild einkorn wheat): 125550853
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Entry
125550853 CDS
T08232
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125550853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tua03032
]
125550853
03400 DNA repair and recombination proteins [BR:
tua03400
]
125550853
DNA replication proteins [BR:
tua03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
125550853
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
125550853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
BRCT_3
RTT107_BRCT_5
TopBP1_BRCT0
NIBRIN_BRCT_II
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
125550853
NCBI-ProteinID:
XP_048569923
UniProt:
A0A8R7Q2B0
LinkDB
All DBs
Position
4:complement(93498000..93510413)
Genome browser
AA seq
978 aa
AA seq
DB search
MTPSHAPAPAAPATSFGGGRRTATFAGASVFLSRKLVAPEVFDAVHDALRLNGADVLLCA
DPTRTGPLDYHVISSSSHERFADLKDKGCNLLGPQCILSCAKEHRSLPKQGYTCCLAMDG
VTILCSGFEKDQRARIEQLVTAMGGLLQTKVSMDVNFVVAKDVSAAKYKWAVNSLKKPIV
NMNWLEQCWIEHRVVPHEPYRILPFTGLNICITKLDADKRKELMEIIEQNGGQYSANLTK
KCTHLVANEPGGDKYLVAKKWGNIHIVDRRWVDQSVARRAYLDESAYVIGQNSFNYNGIK
GSLKEQRNPEMSGASFQSVPAVSVDDSVSMSQYVPVSSGYASMICTTDIVGAPCVQETNE
MPVESHVAEDSEAEDDDLYLSNCRISLVGFEEKELSRLVMMIRNGGGSRHVMLSERLTHI
ILGAPSEEEKKEVRRLAAWGVINVVKAKWLEDCNKIKTEVKVSTAHLASELLSKEFPFVG
MEKSAATRETKAAKSSHGIFHVPTVSDSHDKQLAKDPSSERKPAKGKHENMNNARAATRS
AKSSQQNGLTSTGKATSAANSQRSTSSNIFEGRTFCFSNSFSHDRRPEVIDWVRKGGGTM
VVDDAQATGVDFIIECHGQNSMQCDYSHSTVVSTQWIASCIEVGHLQDVGSHPIFSPLRC
RIPLPGFEDFRFCVSQYDEKDRVLLKNLCLTLGAKFTEKASKRVSHLICKFASGPKYEAY
HNKRIPTITIEWLFECVRQDTIMPYDQFQPKPPTSQDKDAGMCIVSQFPTQAANTTSKFD
CPEPLSEPQVPRSSSKHSSGSSISEEKIASSVSKRRRSETAKANDTSTNIGRTEKHSDSS
SALGVADSIKDFEDLLVQSSRDPALDASVVGQDEEPQPVPDNAFTSLYNDMKTRSNNWPQ
KQHMPPGKNVKSPDSTRAPVPTPYLPFSETQTDSQIIGYEEDLTGMQKIIDRVSSQKKTI
DSSGTDSSVMGHQWDSLK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgtcgcacgcccccgcccccgccgcgccggccacctccttcggcggcgggcgg
aggaccgccacgtttgcgggcgccagcgtgttcctctcgcggaagctggtggcccccgag
gtgttcgacgccgtgcacgacgcgctccgcctcaacggcgccgatgtcctcctctgcgcc
gaccccacccgcacggggcccctcgactaccacgtcatctcctcctcctcccacgagagg
ttcgcggatctgaaggacaaaggctgcaatctgctaggaccacaatgcatcctttcctgt
gctaaggagcatcgttccctacctaaacaaggctatacttgttgtcttgcaatggatggg
gttactatactctgttcaggcttcgagaaagatcagagggccaggattgaacaattagtg
acagctatgggaggtcttttgcagactaaagtgtccatggatgttaacttcgtagttgca
aaggatgtctcggctgcaaaatataaatgggccgtgaatagcctgaagaagcctattgtc
aatatgaactggttggagcaatgctggatcgaacatcgtgttgtgcctcatgaaccttac
aggattcttccttttactgggttgaatatatgcatcacaaaactagatgcagataaacgg
aaggagttgatggaaataatagagcagaatggtggccagtattcagcaaatcttacaaaa
aagtgcactcatttagttgcaaatgaacctggcggtgacaagtatcttgtagctaaaaaa
tggggtaatattcacattgtggatcggagatgggttgaccaatctgttgctcgaagagct
tatctagatgaaagtgcctatgtcattggccagaattcttttaattataatggcataaag
ggttcccttaaagagcaacggaacccagagatgagtggtgcaagttttcaatctgttcca
gcagtatcagttgatgattcagtatcaatgtcacagtatgtgccagtttcttctggttat
gcttcaatgatctgtaccactgatattgtcggtgcaccttgtgtacaagagacaaacgag
atgccggttgagagtcatgtagctgaggattcagaggctgaagatgacgatctgtactta
tcaaattgcagaatttctcttgtgggttttgaggagaaagaattgtcaaggttagtcatg
atgatacgtaatggtggtggatcccggcatgttatgttgagtgagaggcttactcatatt
attctaggtgcaccttcagaggaagaaaaaaaagaggtaagacgccttgctgcttggggt
gtgataaatgtggtaaaggcaaaatggttagaagactgcaataaaataaaaacggaagtc
aaagtatccacagctcatttggccagcgagttactctcgaaagaatttccgtttgtgggt
atggaaaaatctgctgctacacgtgaaacaaaggcagccaaaagttcacatggaatattc
catgttccaactgtcagtgattcacatgataagcagctcgcaaaagatccgtcatctgaa
agaaaaccagccaagggcaaacatgaaaacatgaataatgcccgagcagcaactaggtct
gcaaaatcaagccaacaaaatggattgaccagtactggcaaagcaacttctgcagcaaat
tcacagcgtagcacttcctcaaatattttcgaagggagaacattttgtttctcaaattca
ttttctcatgaccggagaccggaggttatcgattgggtcagaaaagggggaggcactatg
gtcgtggatgatgcacaagcaactggtgtggatttcataattgagtgccatggacagaac
agcatgcaatgtgactattctcattcgaccgttgtttcaactcaatggatagcctcatgt
attgaggtgggccacttgcaagatgttggaagtcatcctatcttctctcctttgcggtgt
cgcatcccattgccagggtttgaagacttccgtttctgtgtttcacagtatgatgagaaa
gatagagttctgcttaagaacctctgtcttactctaggagctaaattcacagagaaagca
tcaaaaagagtgagccatcttatctgtaaatttgcgagcggtccaaagtacgaggcatac
cataataagagaattccaacaattaccatagagtggctcttcgaatgtgtgagacaggac
accattatgccttacgaccagtttcagccgaaaccacctacttctcaggacaaggatgcc
ggtatgtgcattgttagtcaatttccgacacaagccgccaatacgacctctaaatttgat
tgccctgagccacttagtgaacctcaagtaccaagaagcagttcaaaacacagctcaggc
tcctctattagtgaggagaaaattgcttcttctgttagcaaaagaagacgatccgaaaca
gccaaggctaatgatacatctacaaatattggacgaacggagaaacattcggacagcagc
tctgctctgggtgttgcagactccataaaggactttgaggacctactggttcagtcatcc
agggatcctgcacttgatgcttctgttgtaggtcaagacgaggaacctcaacctgtgcca
gataatgctttcacttccctatacaatgacatgaaaacccgctcaaataactggccacag
aagcaacacatgccccctggcaagaatgtcaagagcccagactccacccgggcccctgtc
ccaactccctatctacctttcagcgaaacgcagacagattctcagatcatcgggtacgaa
gaagatttgactggcatgcagaagatcattgacagagttagttctcaaaaaaagaccatc
gacagttcaggcaccgacagttcagtcatggggcatcaatgggactccctcaaatga
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