Triticum urartu (red wild einkorn wheat): 125551552
Help
Entry
125551552 CDS
T08232
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125551552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tua03041
]
125551552
Enzymes [BR:
tua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125551552
Spliceosome [BR:
tua03041
]
Complex C
Other components
Step II factors
125551552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
S1
DEAD
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
nSTAND3
AAA_16
Sigma54_activ_2
TsaE
ABC_tran
Flavi_DEAD
nSTAND_NTPase5
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
125551552
NCBI-ProteinID:
XP_048570762
UniProt:
A0A8R7U6Y2
LinkDB
All DBs
Position
4:complement(305911456..305916145)
Genome browser
AA seq
1234 aa
AA seq
DB search
MAPAAGEGPGDDGLRKLEYLSLVSKVCSELETHIGVGDKVLAEFITELGRDAPSVADFDA
KLKANGADLPDYFVRTLLTIIHAILPPPSHNPSSAASQSNSKYRALSRPDDADRARELRL
ELERDANATAATTPAPSRDRSRDDRSRDRDHDRTRDERGRDRDHGRSRDRDRGRGDCSHN
RDRAHDDRGQDRNHDRGCEHDHGWDRDRDRGRDRDREGDRDGNGRRAQDRLQQRDRDTGK
AHGRSRRYVDEEEGQQERAGGRKTENTLTNSSGEPELYQVYRGRVTRVMDTGCFVKLEDV
RGGREGLVHVSQMASRRIANAKEVVKRDQEVFVKVVSVKGDKLSLSLRDVDQDTGKDLLP
MQRGVEDAPRTNPSVGSAAAAGSGRRLGLSGIVITEEDEVAPISRRPLKRMSSPERWEAK
QLIASGVLDVRDYPQFDEDGDGMLYQEEGAEEELEIELNEDEPEFLQGQSRFSIDMSPVK
IFKNPEGSLSRAAALQTALIKERREVREQEQRAMLDSIPKDLNRPWEDPMPDTGERHLAQ
ELRGVGLSAYDMPEWKKEAYGKALTFGQRSKLSIQDQRQTLPIYKLKKELIQAVHDNQVL
VVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGY
AIRFEDCTGPETVIKYMTDGMLLREILVDENLSQYSVVMLDEAHERTIHTDVLFGLLKQL
VKRRPDMRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITV
LQIHLTEPEGDILVFLTGQEEIDHACQCLYERMKGLGKDVPELIILPVYSALPSEMQSKI
FEPAPPGKRKVVVATNIAEASLTIDGIYYVIDPGFAKINVYNSKQGLDSLVITPISQASA
KQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGSTVLNMKAMGINDLLSFD
FMDPPAPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDE
ILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFE
NFVQSRSLRRAQDVRKQLLTIMDRYKLDVIAAGKNFMKIRKAITAGFFFHAARKDPQEGY
RTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVVDPKWLVELAPRFYKGA
DPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggcggcgggggagggtcccggcgacgatgggctccgaaagttggagtacctg
tcgctcgtctccaaggtctgctcggagctggagacgcacatcggtgtaggcgacaaggta
ctggctgagttcattaccgagctcggccgcgacgccccctcggtcgccgatttcgatgcc
aagctcaaggccaacggcgccgacctccccgactacttcgtccgcacgctcctcaccatc
atccacgccatcctcccgccgccctcccataaccctagctccgccgcctcgcagtccaac
tccaagtaccgcgcgctctcgcgccccgacgacgcagatcgcgcccgcgagctccgcctc
gagcttgagcgtgatgccaatgccacagcggcgaccacccctgccccttccagggaccgc
agtcgcgatgaccgctctcgggaccgtgaccatgaccgcacgcgtgatgaacgcggacgg
gatcgtgaccatggccgcagtcgtgacagagaccgcgggcgtggtgattgcagccataac
cgtgaccgagcacatgatgaccgtggccaggatcgtaaccatgaccgaggctgtgaacat
gatcatggctgggacagggatcgagaccgtggtcgcgacagagaccgggagggagatcgg
gacggtaatggtcggagggcccaggaccgcctccagcaaagggacagggatactggcaag
gcccatggaaggagcaggaggtatgtggatgaggaggagggacagcaggaaagggctgga
ggaaggaagacagagaataccctgacaaattcaagtggcgagcctgagctttaccaggtg
tacagggggagggtgacccgtgtaatggacaccggttgctttgtcaagcttgaggatgtt
cgtggtggccgtgagggacttgttcatgtatcgcagatggcaagcagacggatagccaat
gcaaaggaggtggtgaagcgtgatcaggaggtgttcgtgaaggtagtttcggtaaaggga
gataagttgagtctctcactgagggatgtggatcaggatacaggaaaggaccttctgcca
atgcagcgtggtgtggaggatgctccaaggactaacccatctgttggtagtgctgctgct
gctgggtctggaaggaggttgggtctatcggggattgtgattacagaggaggatgaggtt
gcacccatctcgcggcgtcccctcaagcggatgagctcaccggagaggtgggaagcgaag
cagctaattgcttcgggtgttctcgatgtgagggattacccacagtttgatgaggatggt
gatggaatgttgtatcaggaggaaggcgcagaggaggagttggagattgagcttaatgag
gatgaaccagagttcttgcagggacaaagcagattctcaattgacatgtcacctgttaag
attttcaagaatccagagggttcattaagtcgagcagcagctctccagactgccctcatc
aaggagcgccgtgaggttagagaacaagagcagagagcaatgctggactcgatacccaag
gatctgaataggccatgggaggacccaatgcccgacacaggtgagcgacaccttgcacag
gagcttagaggtgttggtctatcagcttatgacatgccagaatggaagaaggaagcatat
ggaaaagctttaacgtttgggcaaaggtcaaagctttcaatacaagatcagaggcaaact
cttccaatatacaagttgaagaaagagttgattcaagctgtgcatgataatcaagtttta
gttgttatcggagaaactggctctggaaagacaacgcaggtgacacaatatttggctgaa
gctggttataccacaaggggtaaaattggctgtactcaacctcgtagggtggctgcaatg
tctgttgcaaagagagtggcagaagaatttggctgtcgactgggagaggaagttggttat
gccattcgctttgaggattgcactggcccagaaactgtgataaaatacatgaccgatgga
atgcttctgcgtgaaattttagttgatgagaacctttcccagtattcagtagtcatgctt
gatgaagcgcacgaaaggaccatccacacagatgttctcttcggtttgctgaagcagctt
gttaagcgtagacctgacatgaggcttattgttacttctgctacccttgatgctgaaaag
ttctctgggtatttcttcaactgcaacatcttcacaattccgggaagaacattcccagtg
gagatactctacaccaaacaaccagaaagtgactacttggatgctgcattgattaccgtg
ctgcagatccacttgacagagccagagggtgatatccttgttttcttgactggtcaagag
gagattgatcatgcctgtcaatgtttatatgagaggatgaaagggctgggaaaggatgtt
cctgagctcataattttgcctgtgtatagcgctctgcctagtgaaatgcagtcaaagatc
tttgagccagctccacctgggaagaggaaggtggtcgtagccaccaatattgctgaagct
tctttaaccattgatggcatatattatgtcatcgaccctggcttcgccaaaatcaatgtt
tataattcaaaacaagggcttgattcattggtcatcactccaatctcacaagcatcggca
aaacaaagagcagggcgtgctggccgtactggaccaggcaaatgttatcgtctatacact
gaaagtgcttaccgcaatgaaatgtcaccaacgacgattccagaaattcaaaggatcaat
ttgggctctacagttcttaatatgaaggcaatggggataaatgacctactatcctttgat
tttatggaccccccagcaccccaagcacttatctctgctatggaacagctttacagcctt
ggcgctcttgatgaggagggccttcttaccaaactgggaagaaaaatggctgaatttcca
ctggatccaccactttcaaagatgctactagctagcgtcgaccttggatgcagtgatgag
atactgactattatagcgatgattcaaacggggaatattttctataggcctagagaaaaa
caggctcaagctgatcagaaaagggccaaatttttccagccagagggagatcatcttacc
ctacttgctgtatatgaggcttggaaagcaaagaacttttcagggccctggtgctttgag
aactttgttcagtcaagatcgctaaggagagcacaagatgtcagaaagcagcttctaact
atcatggatagatataagttggatgttatcgctgctgggaagaacttcatgaaaataagg
aaagcaatcactgccggcttctttttccatgctgccaggaaagatccccaggaaggctac
agaaccttggtggagaaccagccagtgtacattcacccaagcagtgcgctgttccagcgc
caaccagattgggtcatttaccacgagcttgtaatgacgaccaaggagtatatgagggag
gtgaccgtggttgacccgaaatggttagtggagttagcgccaagattctacaagggcgca
gatccaaccaagatgagcaagaggaagcgacaggaaaggattgagcctctgtacgacagg
taccacgagcccaactcatggcgtctcagcaagcgccgagcttga
DBGET
integrated database retrieval system
