Triticum urartu (red wild einkorn wheat): 125552003
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Entry
125552003 CDS
T08232
Name
(RefSeq) DNA mismatch repair protein MSH2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
125552003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tua03400
]
125552003
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
125552003
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
ATG17_like
Motif
Other DBs
NCBI-GeneID:
125552003
NCBI-ProteinID:
XP_048571399
UniProt:
A0A8R7JX40
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Position
1:complement(143732697..143745109)
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AA seq
959 aa
AA seq
DB search
MDSEDCLPEGGKLPELKLDARQAQGFISFFKKLPKDPRAIRFFDRRDYYTAHGENATFIA
KTYYHTMTALRQLGGNSDGISSVSVSRAMFETIARNLLLDRTDHTLELYEGSGSSWRLTK
SGTPGNIGSFEDILFANNDMQYSPVTVALFPVFREGQLYVALSFVDMTNRKLGLAEFPED
SRFTNVESALVALGCKECLLPADFEKSIDLQPLQDAISNCSILLTERKKAEFKSRDLVQD
LGRIIRGSVEPVRDLLSQFDYALGTLGALVSYAELLADDTNYGNYTIEKFNLDCYMRLDS
AAVRALNIVEGKTDVNKNFSLFGLMNRTCTAGMGKRLLNKWLKQPLIDVNEINNRLDMVQ
AFAEDPELRQGLRQQLKRISDIDRLTHALRKKSANLQPVVKLYQSCSRIPYIKGVLQQYN
GQFSTSVMTRFLSSLEEWLTENRYGRFANLVETAIDLGQVDNGEYRISPLYSSDLAVLKD
ELSEVENHINNLHMHTATDLDLSVDKQLKLEKGPFGHVFRISKKDEQKVRKKLTTNYIII
ETRKDGVKFTSAKLKKLGDQYQSLLGDYTSCQKKIVDNVVQVSCTFSEVFENFAAIISEL
DVLQSFADLAISCPVPYVRPDITTSEEGDIILQGSRHPCVEAQDGVNFIPNDCTLVRGKS
WFQIITGPNMGGKSTFIRQVGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQLRGV
STFMQEMLETASILKGASEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFAT
HFHELTALANKNGDQHQHVPDLGIANYHVGAHIDPSSRKLTMLYKVFIMIMSLFSSGSCV
QKVEPGSCDQSFGIHVAEFANFPEAVIALAKSKAEELEDFTSAPNLSGEPSDEVGSKRKR
VFSPDDVTRGAARARLLLEDFSALPLDEVDGSKATEMVAKLKSDFEKDAASNPWLQQFL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgaagactgcttgccggaggggggaaagctcccggagctcaagctagatgcg
aggcaagcccagggtttcatctccttcttcaagaagttgccgaaggatcctcgggccatt
cgtttctttgatcgccgggattattacactgctcatggtgagaatgcaacctttattgca
aagacatactatcacacaatgactgccttaaggcagctgggcggtaactctgatggaatc
tcaagtgtcagtgttagcagggctatgtttgagaccattgcacgcaaccttttgttagat
aggacggaccatacactggagctctatgagggaagtgggtcaagttggaggttaacaaaa
tctggaacacctggaaacataggcagttttgaagatattctgtttgcaaacaatgacatg
caatattccccggttactgttgcattgtttcctgtcttccgtgaaggtcagctatatgta
gcgcttagttttgtggatatgacgaaccggaagcttgggttggctgagttccctgaagat
agtcgatttacaaatgtggaatcagcccttgttgcattaggttgcaaggagtgtcttctt
ccagcagattttgagaaatcaatagatttgcagcctcttcaggatgctattagcaattgc
agcattctactgactgaaagaaagaaggctgaatttaaatctagagatcttgtgcaggat
cttggtagaataatcaggggttctgtcgagccagttcgtgatctcctatctcagtttgac
tatgctttgggtacccttggagctctagtatcatatgctgagttgctagcagatgacact
aattatggaaattacacgattgagaaattcaatttggactgctacatgcgacttgattct
gccgcggtgcgagcattgaatattgttgaaggaaaaactgatgtaaacaagaattttagt
ttgtttggtttgatgaacagaacctgcactgctgggatgggaaagcgactgcttaacaaa
tggctgaaacaacctttgatagatgtaaacgaaatcaataacagattagatatggttcag
gctttcgcagaagatccggagcttcgtcagggtcttaggcaacaacttaaaaggatatct
gatattgatcgcctaacacatgctctccgtaagaaatcagccaacctgcagcctgttgtt
aagctctaccagtcctgctctagaatcccatacatcaagggtgttcttcagcaatacaat
ggccaattttctacatctgtaatgacaaggttccttagctctttagaagagtggctgaca
gagaatcgatatggtaggtttgctaatcttgttgagacagccattgacctcggtcaagta
gacaatggcgagtacaggatatctcccctatattcttctgatttggctgtgctgaaggat
gagctttctgaagtcgaaaatcacataaacaatttgcacatgcatacagccactgatctg
gatctttctgttgataagcaattgaagctagaaaaaggcccatttggacatgtgttcaga
atctcaaagaaagatgaacagaaagtcaggaaaaagctcacgaccaattacattatcata
gaaactcgtaaagatggtgtgaagtttacaagcgccaagcttaaaaagctaggtgaccaa
taccagtcactgcttggtgattacacaagttgccagaaaaagattgttgataatgtagtg
caagtttcatgcaccttctcagaggtatttgagaattttgctgcaattatatccgagttg
gatgttttacagagttttgctgatttggcaataagttgcccagttccttatgtaagacca
gacatcacaacatcggaggaaggagatattattctacaaggtagtcggcatccttgtgtg
gaggcccaagatggtgttaacttcataccaaatgattgcactttggtgaggggaaaaagt
tggtttcaaatcatcactgggccaaacatgggtggaaaatccacttttatacgtcaggtt
ggcgtaaatgtcttgatggcacaagttggttcctttgttccttgtgatcaggcaagcatt
agtgtgagagattgtatttttgctcgtgttggtgctggtgattgccaactccgtggtgtt
tcaacctttatgcaagagatgcttgaaacagcatccattttgaaaggtgcatctgagaaa
tctctcataattatcgatgagttgggacgaggaacttccacatatgatggatttggtctt
gcatgggctatctgtgagcatcttgtggaagtgactagggcgcctacattgtttgcaact
cattttcatgaattaactgcattagcaaataaaaatggtgatcagcaccaacatgttcca
gatttgggaattgcaaattatcatgtgggtgcacatatagacccatcaagtcggaagttg
actatgctttataaggtcttcatcatgataatgtccctattttccagtggtagttgtgtc
caaaaggttgaacctggttcctgcgaccaaagttttggtatccatgttgcggaatttgct
aattttccagaagctgtcattgctcttgcaaaaagcaaagctgaagagttagaagacttt
accagtgcacctaacttgagtggtgaacccagtgacgaggttggatcgaaacgcaagagg
gtgtttagcccagatgatgtgacgaggggagctgctcgggctcgccttttgttggaggat
ttttctgcattgcctctagatgaggtggatgggagcaaggctacggagatggtggccaaa
ctgaaatcagacttcgagaaagatgcagccagtaatccctggctgcagcagttcctctga
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