Triticum urartu (red wild einkorn wheat): 125552265
Help
Entry
125552265 CDS
T08232
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125552265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125552265
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
125552265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
zf-P11
DUF1258
zf-RING_2
Ten_N
Motif
Other DBs
NCBI-GeneID:
125552265
NCBI-ProteinID:
XP_048571718
LinkDB
All DBs
Position
4:complement(498236005..498239611)
Genome browser
AA seq
575 aa
AA seq
DB search
MWGAADLVLKAACDACGKASELYSTACRHATLCNSCAATMARSRARCNVCAAPITNVIRV
PATALGFRFRDQRHCRRRRAWRFSALLSLTVLFVPTAPQEYNVRVDTAAGKALSIAKFNT
GVPPFSKMKGAGNKWSLRKDGPTHGRQLTAEMREKYYNRKPWILEDDTGEHQYQSKLEAS
QSATATYYLLIRRGKEFDAVPVGSWYNFSKIAQYKQLTLEEAEEKMNKRRSSATGYERWM
MKTATHGAAAFGSDLKDLGDAKGKAANGVQSKKESSNEDGNHSDKGEEDEEEGVAKKAVC
RLSTRGVDDEEDGGKEDFDLEDETEIGDDWEHEETFTDDDEALDIDPEERPDVADTENPT
GPDIKQDDDENEQGAGGSLSKSGKELKKLLRRADGQNESDDEDDGDTDEDESPLSVLAPK
LEHQFGSEQQENNTAKLTATELAVSTPPAPRSNQKRKSGGDGAKTLNRAAVKKPKTEPEA
KTLGVKEERPSSVEPISKASASAGSGTDTSAITEEEIIRVLRAIAPVRSQDFVPRFKARI
RTPEDKKHFHDIVMKYAYSHKTNGVSYLHLRKEYQ
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcgccgccgacctggtgctgaaggcggcgtgcgacgcctgcggcaaggcgtcc
gagctctacagcaccgcctgccgccacgccaccctctgcaactcctgcgccgccaccatg
gcgcgctcgcgcgcgcgctgcaacgtctgcgccgcccccatcaccaacgtcatccgggta
cccgcgacggccctaggttttcgattccgcgatcaacgccattgccgccgccgccgcgct
tggcggttttctgctctgttgtccctgaccgttttgtttgttccaacggccccgcaggag
tacaatgttcgggtggataccgccgcggggaaggccctttccatagccaaattcaacacc
ggcgtgccgcccttctccaagatgaagggtgcggggaacaagtggtctcttcgtaaggat
ggtccgacgcatggccgtcagcttactgccgaaatgcgggagaaatactacaacagaaag
ccatggatattggaagatgatacaggtgaacatcagtaccaaagtaaacttgaggcatca
caatctgcaactgctacatactatctgctgattaggcgcggcaaggagttcgatgctgtt
cctgttggttcctggtataacttcagtaaaattgcacagtacaaacaactgactttggaa
gaagctgaagagaagatgaataaaaggagaagcagtgcaactggttatgaacgatggatg
atgaagacagctacacatggagctgctgcctttggttcggatctgaaggatcttggtgat
gcaaagggcaaagcggcaaatggggtccaatccaagaaagaaagtagcaatgaggatggg
aatcactctgataaaggcgaggaggatgaagaagagggagttgcaaagaaagctgtgtgc
agactttctacgaggggcgtggatgatgaagaggatggtggaaaagaagactttgatttg
gaggatgagactgagataggtgatgattgggagcatgaagagaccttcactgatgatgat
gaggctctggatattgacccagaggaaagacctgacgtagctgatactgaaaaccctact
ggaccagatattaagcaggatgatgatgagaatgaacaaggagctggtggtagcctgagc
aagtccggtaaggaactaaaaaagctgctccgccgtgctgatggacaaaatgagtccgat
gacgaagacgatggagacactgatgaagatgagtcaccattgtcagtacttgctccaaaa
ctggaacatcaattcggaagcgaacaacaggaaaataacactgctaaactaacagcaaca
gaacttgctgttagcactccacctgcacccaggtccaatcagaaaaggaaatccggaggt
gatggtgcaaaaactttgaatcgtgcagcggtaaaaaagccaaagacagaacctgaggca
aaaacattaggtgtcaaggaagagcgaccctcttccgtggaacctatttcaaaagcatct
gcttcagcagggagtggtacagatacatctgcaattacagaggaggaaatcataagagta
cttcgtgcaattgctcctgtcagatcacaagattttgtacccaggtttaaggccagaata
agaactccagaggacaagaaacattttcatgacattgtcatgaaatatgcatattcgcac
aagaccaacggcgtcagctatcttcaccttcgaaaggagtaccaatga
DBGET
integrated database retrieval system
