Triticum urartu (red wild einkorn wheat): 125552476
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Entry
125552476 CDS
T08232
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03030
DNA replication
tua03420
Nucleotide excision repair
tua03430
Mismatch repair
tua03440
Homologous recombination
tua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125552476
03420 Nucleotide excision repair
125552476
03430 Mismatch repair
125552476
03440 Homologous recombination
125552476
03460 Fanconi anemia pathway
125552476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tua03000
]
125552476
03032 DNA replication proteins [BR:
tua03032
]
125552476
03400 DNA repair and recombination proteins [BR:
tua03400
]
125552476
Transcription factors [BR:
tua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125552476
DNA replication proteins [BR:
tua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
125552476
DNA repair and recombination proteins [BR:
tua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
125552476
MMR (mismatch excision repair)
125552476
DSBR (double strand breaks repair)
HR (homologous recombination)
125552476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
125552476
NCBI-ProteinID:
XP_048572000
UniProt:
A0A8R7Q592
LinkDB
All DBs
Position
4:complement(533716474..533720093)
Genome browser
AA seq
622 aa
AA seq
DB search
MDAKSVTPSAVALILSNPTPESPDDVPEIVVQVLDLKPIGSRFTFMASDGEAKVKAILST
HFASEVHSGKLQNLGLVRILNYTCNDIPQKTDKMVIITKCEVVSQALDAEIKSEVKIEEP
PVLMKPKEEAAGLSKPIGAAPATIMLKPRHDVKSASQIVSEQRGNAAPAARLAMTRRVHP
LISLNPYQGNWVIKVRVTSKGNLRSYRNARGEGHVFNVELTDEDGTQIQATMFNEAAKKF
YPVFELGKVYYISKGSLRIANKQFKTVQNDYEMTLNETAVVEEAEGESFIPPVQYNFVKI
DMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTISLWNDL
ATTVGEELLDMVDSAPIIAVKSLKVSDFQGVSVSTVGKSTLVINPELPEAEKLRAWYESE
GKGTTLASVGAGMGASNAGGLRSMYSDRVFLSHITSDPNLGQDKPVFFSLYANISNIKPD
QTMWYRACTTCNKKVTEALGSGFWCEGCQKNYEQCSLRYIMVIKVSDPTGEAWLSLFNDQ
AERIVGCSADELDRIRKEEGDDMFQLKLKEATWIPHLFRVSVVQNEYMGEKRQRITVRSE
SPVDYSAEARYQLEEIAKLTSS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaagtcggtgacgccgagcgccgtggccctcatcctctccaaccccacgccg
gagtcgcccgacgacgtgccggagatcgtcgtgcaggtcctcgacctcaaacccatcggc
tcccgcttcactttcatggccagcgacggggaggcgaaggtcaaggcgatcctctccacc
cacttcgcgtcggaggtccactccggcaagctccagaacctcggcctcgtccgcatcctc
aactacacatgcaacgacatcccacaaaagacggacaagatggtgatcatcacgaagtgc
gaggtcgtgtcccaggctcttgacgccgagatcaagagcgaggtcaagatagaagagcca
ccggttctcatgaagcccaaggaggaggctgcgggtctctccaagcccattggcgccgcc
ccggctacgattatgctgaagccaaggcacgacgtgaagtccgcgtcccagattgttagc
gagcagcgcggaaatgctgctcccgctgctcgcttggccatgacgaggcgggtgcatcct
ctgatctccctcaacccctaccagggcaactgggtcatcaaggtgcgggtcacaagcaag
ggcaacctcaggtcatacaggaatgcccgtggagaaggccatgtcttcaacgtagagctc
actgacgaggatggcacccagatccaggccaccatgttcaatgaggctgcaaagaagttc
tatcctgtgtttgagttggggaaggtctactacatctccaagggttcactcagaatcgcg
aacaagcagttcaagacagtccagaatgactatgagatgaccctgaatgagactgctgtt
gttgaagaggctgagggggaatctttcattccaccagtgcaatacaactttgtcaagatt
gatatgctggggccatatgttggtggcagggagttagtagatatcattggtgttgttcag
agtgtatcacctaccctgagcatcagaagaaagattgacaatgagtcaatcccaaagcgt
gacattgttgttgcagatgactcgaacaaaactgtcaccatttctctttggaatgatctt
gccaccactgttggtgaggaactcttggacatggttgactctgcacctatcattgcagtg
aagagcctgaaagtatctgactttcaaggtgtgtctgtttctacagtaggcaaaagcaca
cttgtgattaacccagagttgcctgaggctgagaagcttagagcttggtatgaatctgaa
ggcaagggtactaccttggcatcagttggtgctggaatgggtgcatccaacgctggtggc
ttgagatcaatgtactctgacagagtttttctgtctcacatcacaagtgaccctaacttg
ggccaggacaagcctgttttcttcagcctgtatgccaacataagcaacattaagcctgac
cagaccatgtggtaccgtgcttgcaccacctgcaacaagaaggtgactgaggcgctcgga
tcaggattctggtgtgaagggtgccagaagaactatgagcagtgctcattgaggtacatc
atggtgatcaaggtctctgatcccactggtgaggcctggctgtctcttttcaatgaccaa
gcagagagaattgttggctgcagcgcagatgagcttgatcggatcaggaaagaggagggt
gatgacatgttccagctcaagctgaaggaagccacctggattccccacctgttccgtgtc
agcgtggtgcagaacgagtacatgggtgagaagaggcagaggatcaccgtgaggagtgag
tcaccggtcgactactctgctgaagcaaggtaccagcttgaggagattgccaagctcacc
tccagctag
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