Triticum urartu (red wild einkorn wheat): 125552691
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Entry
125552691 CDS
T08232
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125552691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125552691
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
125552691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-GeneID:
125552691
NCBI-ProteinID:
XP_048572296
UniProt:
A0A8R7Q5S7
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Position
4:complement(561244870..561250775)
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AA seq
661 aa
AA seq
DB search
MDGSKGPSDGDAAEEAGDGNKDRTPGASDAVLAAGPFRTAASDGRVPWAAPGAKPKVVYH
DPSIPRPQDVYLIRVNNCNSPFDHVWLERSEDGTRPIHPLEKLPVEQFIDRNVPESEPVR
PADVDDTPFTLVEDLKGLTELVNKLKDVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFI
IDTLKLRIYIGSYLKELFKDPTKRKVMHGADRDIMWLQRDFRVYVCNLFDTGQASRVLQM
ERNSLEHLLHHFCGVTANKIYQNADWRSRPLSDEMIKYAREDTHYLLYIYDLMRLRLQRE
STCENDLLLEVQKRSNDICLQLYEKELLTDKSYLHIYGLQEHELAAAQLAVVSALHQWRD
YIAREQDESTGYVLPNKALIEIAKKMPTTTADLRRIVKTKYPCVEDNFDLILDIVWNATE
NSGAFEAIAEQLKKVRLGELDLKSILDTGEVIEMAPSDADNVGISFDPADQYSLAPSSTA
NIRVTSNSRDSFMTDATLTGSIWLHDKTSTIPSSENRTSWGLSGLTRQSNKEVMSNNKQE
TQAPVQELKRPSPFGALVGNSTSGRQTDYFGGFSNEQAKSDVDQIQSSAYYYPQFSDYSS
LAGWSHHEPERTQASGFMSGCYYGHGYQSINQSSTGTGQPAAGNNGGGLKKQQQPPPHSG
N
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggacgggtccaagggcccgagcgacggggacgcggcggaggaggcgggggacgggaac
aaggacaggacgcccggcgcctccgacgccgttctcgccgccgggccgttcaggaccgcc
gccagcgacggcagggtgccctgggcggcgccgggggccaagcccaaggtggtctaccac
gatcccagcatcccgcggccgcaggacgtgtacctcatcagggtcaacaactgcaactcg
cccttcgatcacgtctggctggagcgcagcgaggacggcacccgccctatccaccccttg
gaaaaactacccgtggaacagtttattgacagaaatgttcctgaaagtgaaccagtaagg
ccagctgatgtagacgataccccgtttacgctagtagaagacctgaaaggattgacagag
ttagttaacaagttgaaggatgtaaatgaatttgctgtcgatttggagcacaatcaatat
aggtcatttcagggtttgacctgcttgatgcagatttcaacaagaacagaggacttcatt
atcgacacccttaagctacgcatatacatcggttcttacttgaaagaacttttcaaagat
ccaaccaagagaaaggtaatgcatggggcagatcgtgatataatgtggctccagcgggac
ttccgagtatatgtgtgcaatctttttgacacaggacaggcttcaagggttttacagatg
gaacgaaacagcctagaacacctattacatcatttctgtggagtcacagcgaataaaata
tatcaaaatgcagattggaggtcaaggccactctctgatgaaatgatcaagtatgcgaga
gaagatacacattatctgttgtatatatatgacttgatgagacttagactacaaagggag
tccacatgtgaaaacgatcttcttttagaggttcaaaagcgcagtaatgatatttgcttg
cagttgtatgaaaaggagctgctgacagataaatcttacctccacatatacgggttgcag
gaacatgaattggccgcagctcagctggctgttgtttctgctctacatcagtggagagat
tatatagctcgtgaacaagatgagagcactggttatgtattgccaaacaaggctttgatt
gagatagcaaagaagatgcctacaaccactgcagatttgcgaagaatcgtgaaaacaaaa
tatccatgtgttgaggataattttgacctaatcttggacatcgtatggaatgcaactgaa
aattctggtgcctttgaagcaatagctgagcaactaaagaaagtacgacttggtgagtta
gacttgaaaagtatactggacactggtgaagttatcgaaatggctccttcggatgctgat
aatgttgggatcagttttgatccagctgatcaatattctttagctccttcatcaactgca
aatatcagggttacttctaacagtagggatagttttatgactgatgcaactttgactggt
agcatctggctacacgacaaaacctcaaccataccatcatcagaaaataggacgtcttgg
ggcttatcaggcctgactagacaatcaaacaaggaagtgatgagcaataataagcaggag
acacaggctcctgttcaagaactgaagagaccttcgccttttggagctctggtaggcaat
tcaacatctggaagacagacagattactttggaggattttcaaatgagcaggctaaaagc
gacgttgatcagattcagtcttcagcttattactacccccagttctcagactacagcagt
ttagctggatggagccatcatgaaccggaacgcacacaggcctctgggttcatgtctggt
tgctattacgggcatggctaccagtcgataaaccaaagcagtacaggaacaggtcagccc
gccgctggaaataatggagggggtttgaagaagcagcaacaacctccccctcattcgggt
aactaa
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