Triticum urartu (red wild einkorn wheat): 125553033
Help
Entry
125553033 CDS
T08232
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125553033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125553033
Enzymes [BR:
tua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125553033
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
125553033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
125553033
NCBI-ProteinID:
XP_048572733
LinkDB
All DBs
Position
4:599522059..599536390
Genome browser
AA seq
1655 aa
AA seq
DB search
MEQEQATSVEVDSILFGFYTDDEVRRLSVKRLTRSERLDAKMCPVPGGLLDPAMGPVNAN
DTCKTCAQQPGNCPGHFGHIELSKPLFNPLLFDTLRDLLRSTCFTCRKFRLSAQLVDRYA
RELELLARGDVVQAKNLQDSAVSEESVEMDEDGSVDKPASPSDRGNKIWTSIQLKEAHSI
FSKLMKKRVNKCANCGMKNPPIKCQIYGWLTIQGTDGSAVRRKAITDYNLEGDGHISNPN
GTGVSGLTDDRVKASSNQTKDLSDDRPLLATEVESILKDLWEKEARFCMLLCDFQKNLCV
SEKRRGYEMFFLKSMLVPPNRFRPSTNSSLGIMEHPQNVMLSKVQEANLALQHDNPNHMD
ILTRWRDLQTSVNLFYDSSKGLVKSDKDGHGVRQLVDKKTGIVRQKIMGKRVNHSCRTVI
SPDPFLAVNEIGIPPAAASKLTYPEKVTPWNAKNLRGAIRNGAEIHPGATHYKVNNNLYK
LQADHSKRHPTAKTLLASRGSISQPGKDPRCEFESKVVYRHIQDGDIVLVNRQPTLHKPS
MMAHVVRVLPGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDANKQYIG
PRSGEAVRGLIQDHIVGAVLLTKVDTFLSREEYSQLVYGSCVSSTRGPCQSGKRVSIVND
DDTLELLPPAFVKPERWTGKQVITTILNHLTKGHPPFTVEMKGKISVQYLTAKVRHVAEG
EKLRDPEELVLYIRHNELLKGMIDKNQFGNHGIVHTVHELYGADTAGRLLSIFSRLFTLF
LQFHGFTCGIDDLLLSQESNNERTDFLSKSEEHSEEAHKKFLCKKDVDTDLVELQMNIEK
VVRRIGESANVALDKAMLSELNGLTTKVNKNMFPYGLQKPFPKNCLTLMTATGAKGGDVN
MTQISSLLGSQDLEGARVPRMISGKSLPCFPPWDGSSRAGGYVSDRFLTGLRPQEYYFHC
MAGRNGLIDTAVKTSRSGYLQRCLIKSLESLFVSYDHSVRNVDGSIIQFCYGEDGVDVHK
SSFLKKFKELADNRKAVSDRLARYKGELDIYNGDPLSFKSKYITKLPQELTKSATNFHKE
NKCCCRKLKKKCRCRYNIKEEELMKLLKVKYVASLVDPGEAVGVILAQSLGEPSTQMTLN
TFHLAGRGDMNVTLGMPRIQEILMKASANIGTPYMKCPVHEGKKRKDAARLAEKLRGVTL
ADVVEGIEVCTVPFHNSNGHISSLYKLHLKLFSPDCYPPESELTVDECQASLRTVFVDAM
EYAIEKHLNLLHKVSGIQETRVKDTESLPSEGPEESEGRPTDGDESDASDGDDENEDDLG
ADAEKRKRQENDEMEYEDDIENEDGMNSDPDEETKHELDNEDDPAESGVESEENDEGHLS
DSSNKTAKLEGGLAATKLKKKRNETVENLKEQKQAQITQKRSKKLKLTVHVESADLNFEV
HYILHKEPHILLSQIAQKTLRSLFVSGSHNKNIGLCNVIWPEKKKKGETETKQKETEREE
AYRGLQTSGLDFEVFWDLQDFLNVRKLTSNDIHAMLRTYGVEAARATIINEVKAVFEPFG
IKVDPRHLSLAADYMTSGGSYRPMNSLGMARFCTSPFGKMSFEQATRFIMEAAYHGEVDN
LTGPSATVSLGKPAKTGTGAFGLMQNITLEERAVM
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggagcaggcgacgtcggtggaggtggactccatcctcttcggcttctacacc
gacgacgaggtccggcggctcagcgtcaagcggctcaccaggtccgagcgcctcgacgcc
aagatgtgccccgtgcccggcggcctgctcgaccccgccatgggccccgtcaacgccaac
gacacctgcaagacctgcgcgcagcagcccggcaactgcccgggccacttcggccacatc
gagctctccaagccgctcttcaacccgctgctcttcgacaccctccgggacctcctccgc
tccacctgcttcacctgccgcaagttccgcctcagcgcccagctggtcgacaggtacgcc
cgtgagcttgagctgctggcgaggggcgatgttgtccaggccaagaacttgcaagattcc
gctgtttcggaggaaagcgttgaaatggacgaggacggttcggttgataaaccggcgtcc
ccttctgaccgagggaacaaaatctggacatccatccagttgaaagaggcccattctatc
ttctccaagctgatgaaaaagcgggtgaacaagtgtgcaaactgcggcatgaagaacccg
cccatcaaatgccagatatatggttggctcaccattcagggtacagatggttctgctgta
agaagaaaagcaatcaccgattataatcttgaaggagatggccatatttccaacccaaat
ggaactggtgtttctggtcttacggatgatagagttaaagcatcaagcaatcaaacaaaa
gacctttctgatgataggcctctcttggctacagaggttgaatctattctcaaagacctg
tgggaaaaggaagccaggttctgcatgttactatgcgactttcagaagaatttatgtgta
tcagaaaagaggaggggctatgagatgtttttcttgaagagtatgcttgtgccaccaaat
agattccgtccctcaactaactctagccttggaattatggaacatccacaaaatgttatg
ctaagtaaagtgcaagaggccaatcttgcgctacagcatgacaatcctaatcacatggat
attcttacaagatggagggatctgcaaacaagtgtaaatttattttacgatagtagtaaa
ggccttgtaaaaagcgataaagatggtcatggtgtacggcaattggtggataagaaaacc
gggattgttcgacagaaaataatgggcaaaagagttaatcattcctgccggacagttata
tctccggatccgtttttggctgttaacgaaattggcattcctcctgctgctgcttcaaag
ctgacttatcctgagaaagtgacgccctggaatgccaaaaatctacgaggagctatacgt
aatggcgccgaaattcatcctggcgcgacacactacaaggttaacaataacctgtataaa
ttacaggctgaccattccaaacgtcatcccactgctaagacgttgcttgcttctagagga
tcaatttctcaaccagggaaggaccctagatgtgaatttgaaagcaaagttgtatatcga
catattcaagatggtgacattgtactggtcaacagacagcctactcttcacaagcccagc
atgatggcccatgttgttcgtgtgttgcctggagagaagacaattcgaatgcactatgcc
aattgcagtacatacaatgccgattttgatggggatgaaatgaatgtgcacttcccgcaa
gatgaaatatctcgggctgaggccatcaacattgttgatgcaaataagcagtacattggt
ccaaggagtggggaggctgtcagaggtctcattcaggaccacattgttggtgctgttctc
ctgacaaaagtggacacattcttgagccgtgaggaatacagtcagcttgtctatgggtct
tgtgtgtcctcaactcgtggtccttgtcaatctggtaaaagggtatccattgtgaatgat
gatgacacattggaacttcttcctccagcttttgtgaagccagagcggtggacgggaaaa
caggtcataacaaccatcttgaaccatttaacgaaaggccacccaccatttactgtggag
atgaaagggaaaatttcagtacaatatctaacagctaaagtacgccatgttgctgaagga
gaaaaacttagagatcctgaagaactagttttatatattcgccataatgagctcttaaag
ggcatgatagacaagaaccagttcgggaatcacgggatagtacatacagttcatgaactc
tatggtgcagatacagctggaagattgctctcgattttcagccgcttgtttacattgttc
ttgcagtttcatggatttacttgtggaatagatgatctgttactatcccaagagtcaaat
aatgagaggacggattttttgtcgaaaagtgaggaacacagtgaagaagcccataagaaa
tttctgtgcaagaaagatgttgatacagatctagtggaattgcaaatgaacatcgaaaag
gttgttcggagaataggagaatctgcgaacgttgcgttggataaagcaatgttaagcgaa
ctaaatgggttaacaactaaggtcaataagaacatgtttccctatggtctacaaaagccc
tttcctaaaaattgtctcactcttatgactgcaactggagcaaaaggaggcgatgttaat
atgacacaaatctcgtcattgctaggctcacaagatttagaaggagcgcgtgttccacga
atgatatctgggaagtcattaccttgctttccaccatgggatggttcttcaagagctggt
ggttacgtcagtgacagatttttaactggtctccgccctcaagagtactatttccattgt
atggctggcagaaatgggttgattgacacagcagtcaaaacatctcgtagtggatatctt
cagcgttgtcttatcaaaagtctcgaatcattgttcgtttcatatgatcactctgtgcgt
aatgttgatggatcaatcatacaattctgctatggagaagatggagttgatgtccataaa
agtagctttctcaaaaagtttaaagaactcgctgataatagaaaagctgtgtctgacagg
cttgccaggtacaagggtgagcttgatatctacaatggcgatcccctgtcattcaagtcc
aaatacattactaaactgcctcaagagctcaccaaaagcgcaacaaattttcataaagaa
aacaagtgttgctgccgcaagcttaaaaagaagtgtcgctgccgttataacatcaaggag
gaggaactaatgaagttactgaaagtcaagtacgtggctagccttgtagatcctggtgaa
gctgttggtgtgatccttgctcaatccttaggagaaccttcaacgcagatgacactcaac
actttccatcttgctggaagaggggacatgaatgtcacacttgggatgcctcgcatacag
gaaatcctaatgaaagcatcagctaacattggcacgccttatatgaagtgccctgtgcat
gaaggcaagaagaggaaggatgctgcacgtctggccgaaaaactaaggggtgttacgttg
gctgatgttgtggaaggaattgaagtatgcacagttccttttcacaacagtaatgggcat
atttcgagtctctataagttgcatctaaaactattctcaccagactgttaccctcctgag
tcggaacttacagtagatgagtgtcaagcatccttgagaactgtgtttgttgatgcaatg
gaatatgcaatcgaaaaacacctaaatttgctacacaaagttagtggaatccaggaaaca
agggtaaaggacactgagagtttaccatcagaaggtcctgaagaatccgagggcagacct
accgacggtgacgagtctgatgcgagtgatggtgacgatgaaaatgaggatgacttggga
gctgatgcagaaaagaggaaacgacaagagaatgatgagatggagtatgaggatgatatt
gaaaatgaagatggcatgaacagtgaccctgatgaagagacaaaacatgaacttgataat
gaggatgatccagctgagtctggtgttgaatcagaagagaatgacgaaggacatttgtca
gattccagtaacaagactgcaaaattagaaggcgggctggcagctactaaactcaagaaa
aagagaaatgaaacggtggaaaacttgaaggagcagaagcaggcacaaataacccagaaa
cgcagcaaaaagttaaagctgactgttcatgttgaaagcgcagatttgaattttgaggtt
cactacatcttgcacaaggaaccacatattttactatcccagattgcccagaagacattg
aggtccctatttgtcagtggatcccataacaaaaacataggtctatgtaatgttatttgg
ccagagaagaaaaagaaaggtgaaactgaaaccaagcaaaaagagacagagagggaagaa
gcctatcgagggctgcaaacgtcaggactggactttgaggtattctgggatctgcaggac
ttcttgaacgtccgcaagcttacatctaacgacatacatgctatgttgaggacatacggg
gtggaggctgcgagggccaccatcattaacgaggtgaaggccgtatttgagccctttggc
atcaaggtagacccgaggcacctgagcctagcggctgattacatgacctcgggaggctcc
taccgaccgatgaacagcctcgggatggcccggttctgcacgtcgccgtttggcaagatg
agcttcgagcaggccacgaggttcatcatggaggcggcctaccatggggaggtggacaac
ctcacgggcccttcggcgaccgtgtccctggggaaaccggccaagaccgggaccggtgcc
ttcgggctgatgcagaatatcaccctggaggagcgggcggtgatgtaa
DBGET
integrated database retrieval system
