Triticum urartu (red wild einkorn wheat): 125553560
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Entry
125553560 CDS
T08232
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua00040
Pentose and glucuronate interconversions
tua01100
Metabolic pathways
Module
tua_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125553560
Enzymes [BR:
tua01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125553560
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125553560
NCBI-ProteinID:
XP_048573290
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Position
4:complement(66008411..66010171)
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AA seq
395 aa
AA seq
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MSGRRLPLLLVVLTALMTLTTVKAEYNVVDYGARPDGAADSAGAFQAAWGAACNDTGSSG
SRPVLRVPAGRFLLSRVYFKGPCRSAGVVVAIDRNGTVFAPPTVDSRAWIMFHHADGLAL
RGGTLDGQGQEYWACKKSGRCTGQGPTTLDISQSKGVSVKQLTLLDSKNVHMAIFDSTGV
TVQGVRMVAPANSPNTDGIHAQLSRHVTILNTTFSTGDDCVSLGPGTSDVLIRDIKCGPG
HGISIGSMGGQPGEEGVRNVTVERAVLTGTTNGLRIKTWGMPNPGSVTGVSFSQVTMHGV
ANPILVDQNYCPRSRKVDCPGKSSGVQISDVSYEDIEGTSRTPVAVKFDCSDTNPCSGIR
LKNIRLTYRHRRPAQARCRNAAGSVSGEVTPPSCF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccgtaggctgccgctactgctggtcgtgttgacggcactgatgacgttgacg
acggtgaaggccgagtacaatgtcgtggactacggcgcgaggcccgacggcgcggcggac
tcggcgggggcgttccaggccgcgtggggcgcagcgtgcaacgacacggggagctccggg
tcccggccggtgctgcgcgtgccggcgggcaggttcctgctcagccgggtctacttcaag
ggcccctgccggagcgccggcgtggtcgtggccatcgaccgcaacggcaccgtcttcgca
ccgccgaccgtggacagcagggcgtggatcatgttccaccacgccgacggcctggcgctc
cgcggtggaacgttggacgggcaggggcaggagtactgggcgtgcaagaagtccggcagg
tgcaccgggcagggccccacgacgctggacattagccagtccaagggcgtgagcgtgaag
cagctaacacttctcgacagcaagaacgtccacatggccatcttcgactccaccggcgtg
acggtccagggcgtcaggatggtcgcgccagccaatagccccaacaccgacggcatccac
gcccagctctcccgccacgtgaccatcctcaacaccacgttcagcaccggcgacgactgc
gtctccctggggccaggcacctccgacgtgctcatcagggacatcaagtgcggcccgggc
cacggcatcagcatcgggagcatgggagggcagcccggcgaggagggggtgaggaacgtg
acggtggagagggcggtgctgacgggcacgacgaacggcctgcggatcaagacgtggggg
atgcccaacccaggctccgtcacgggcgtctccttctcgcaggtcacgatgcacggcgtg
gcgaaccccatcctcgtggaccagaactactgcccccgcagccgcaaagtcgattgcccg
ggcaagagctcgggggtgcagatcagcgacgtgtcgtacgaggacatcgagggcacgtcg
aggacgcccgtggccgtgaagttcgactgcagcgacaccaacccctgcagcgggatcagg
ctcaagaacatcaggctgacgtaccggcacaggcggccggcgcaggccaggtgccggaac
gccgccgggtccgtgtccggagaggtcacgccgccgagctgcttctga
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