Triticum urartu (red wild einkorn wheat): 125553578
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Entry
125553578 CDS
T08232
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125553578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tua03021
]
125553578
Transcription machinery [BR:
tua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
125553578
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
ELL
DZR_2
zf-RING_5
DUF3069
SOG2
Motif
Other DBs
NCBI-GeneID:
125553578
NCBI-ProteinID:
XP_048573305
LinkDB
All DBs
Position
1:185608897..185619757
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AA seq
530 aa
AA seq
DB search
MGSVDLVLKPACEGCGSTSDLYGTGCKHTTLCSSCGKSMALSRARCLVCSALITNLIREY
NVRANASTDKAFSIGRFVTGLPPFSKKKNAENKWSLHKEGLQGRQLTDKMLEKYNRKPWI
LEDETGQYQFQGHMEGSQSATATYYLLMLHGKEFHAFPAGSWYNFSKVAQYKQLTLEEAE
EKMNKRKTSATGYERWMMKAATNGPAAFGSDMMKLEPANDGEKESARHKKGKDNEEGNNS
DKGEENEEEEAARKDRLGLSKRGMDDDEEGGKDLDFDLDDDIEKGDDWEHEETFTDDDEA
VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGRSSGQNESDADDDD
EEDDDDESSPVLAPKQTDQPKDEPVDNSPAKPTPSSGHARSTPPASKSKQKRKSGGDDAK
ASSGAASKKAKVESDTKTSSIKEETPSSSKPTPKASASSRSVNVSPVTEDEIRTVLLAVA
PVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVLREDKK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgtagacctggtgctgaagccggcgtgcgagggctgcggctccacgtcggac
ctctacggcactgggtgcaagcacaccacgctctgtagctcctgcggcaagtccatggcg
ctttcccgcgcccgatgcctcgtctgctctgcgctcatcacgaacctcatccgggaatac
aatgtgcgggcaaatgccagcacagataaggcattctctattggaagatttgtaactggt
ttgccgccattctcaaagaaaaagaatgctgagaacaaatggtctcttcataaagaaggc
ctgcaaggacggcagcttactgacaaaatgctggagaaatacaacaggaagccatggatt
ttggaagatgaaactggtcaatatcagtttcaaggtcatatggagggatcacagtcagca
acagctacatactatttgttaatgttgcatggcaaggaatttcacgcatttcctgctggt
tcctggtataacttcagtaaagttgcgcagtacaagcagctgactctggaagaggccgag
gagaagatgaataagagaaagactagtgcaactggttatgaacgttggatgatgaaagca
gctacaaatgggccagctgcctttggttcagatatgatgaaacttgagcctgctaacgat
ggggaaaaagaaagtgctcgtcataagaagggaaaagataatgaggagggtaataattct
gataaaggtgaggagaatgaagaagaggaagccgctcgtaaagataggctcgggctctct
aaaaggggcatggatgacgatgaggaaggtggaaaagatctagattttgatttggatgat
gacattgagaaaggtgatgactgggaacatgaagaaacattcaccgatgatgacgaggct
gtggatatcgacccagaggagcgggcagatttagctcctgaaattcctgctccacctgaa
attaagcaggatgatgaagagaatgaggaagaaggtggcctgagcaagtcaggaaaggaa
ttaaagaagctgcttggtcgttcttctggacaaaatgagtcggatgccgacgatgatgat
gaagaagatgatgatgatgagtcatctccagtccttgctccaaagcagacggatcaacca
aaagatgaacctgttgataacagcccagccaaacctacaccttcatcaggacatgctcgt
agtacacctcctgcatcgaaatccaagcaaaagaggaaatcaggtggtgatgatgccaaa
gcatctagcggtgcagcttcaaagaaagcaaaggtggaatctgatacaaaaacatcaagt
atcaaagaggagacaccatcttcctcaaaacctacaccaaaggcctctgcttcatcaaga
agtgtcaatgtatctcctgtgacagaggatgagatcaggaccgttcttcttgcagtggct
cctgtcactacacaagatttagtctccagatttaagtctagactacgaggtccagaggac
aagaacgcctttgctgaaattctgaagaaaatttcgaagatacagaagactaatggccac
aactatgttgtccttagagaggataagaaatga
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