Triticum urartu (red wild einkorn wheat): 125554253
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Entry
125554253 CDS
T08232
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
tua
Triticum urartu (red wild einkorn wheat)
Pathway
tua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125554253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tua03019
]
125554253
Messenger RNA biogenesis [BR:
tua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
125554253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
Motif
Other DBs
NCBI-GeneID:
125554253
NCBI-ProteinID:
XP_048573789
UniProt:
A0A8R7NXL2
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All DBs
Position
1:214825732..214831804
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AA seq
910 aa
AA seq
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MEADEAPHPPPPWKQNKSAVAVEASSGSLASAAARLSARSRAIPPARDFHFYNNFPSFKS
PVAAAAARAESSLGVLGASTLLPKQQQQQPPFPTEDLDDAYDWLVARNDDLLEMFAASAD
EFKALREKEEAQGRKVAAEEMAGDGFQVVYGKKKKKVGMGEEGVGRSEAFGSSGSVRMAT
MDRAAASGPKPKVPFHIPTIPRPQDVHRIVVDNTSKPFDHTFLERSDDGARAIHPLEKLP
MEQLFDRRVPGSEPLEPPALDDTPFTFVEDRKTLEVLVTKLKSATEFAVDLEHNHYRSFQ
GLTCLMQISTRTEDFIVDTLKLRNCLGENLREVFQDPTKKKVMHGAGRDIIWLQRDFGIY
VCNLFDTGQASRILQMDRNSLEHLLQYFCGVTANKEYQSADWRLRPLPDEMTKYAREDTH
YLLYIYDLMRLRLVNESSGDDLLLEVCKRSNGICLQLYEKELLTDSSYLYIHGLKENDLS
ARQLAVLAGLYQWRDGVARAEDESTGYILPNKTLLEIAKQMPVTTGRLKRTVKSKNKFLE
HYLGHVITIIRNAVANADAFESIAEQLKKGRLEELMAAEAKDGSEDSEMIPAVDADSNES
NLQLIAEPDVAPTVITNVHTASFCTGNVTSGASLGNLQLDNITPETRSFGALPGATGQAD
TVIPSNGGGQQQVIKATVQVLKRPTAFGALLGKPSTARRPNLFPGFSSDQNKSKVEKIKS
SVVLPFHHFSGGANPPATSPPVAKSSEHEAEIMCEDPVSRMEEVIQLDTGTDDPENGNAD
GQSDCKPGDTDVSSSPPEPSSGIEQRCRSLNESRDLQQKHQAPEELEFNDQLKAFDYAEA
RKNTSFGEVRSERRKDNAVASAINVDSGDKRKSLKQTPGAGGGEEDEGNFQNPRRRQAFP
PSGNRSATYH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggacgaggcccctcacccaccgccgccgtggaagcagaacaagtcggccgtg
gccgtcgaggcctcgtcgggctcgctcgcctccgccgccgcgcgcctgtcagcccgctcc
cgcgcgatccctccggcccgcgacttccatttctacaacaacttcccctccttcaagtcc
cccgtcgccgccgccgccgccagggccgagtcctccctgggcgtcctcggcgcctccacg
ctcctccccaagcagcagcagcagcagccgcctttccccacggaggacctcgacgacgcc
tacgactggctcgtcgcccgcaatgacgacctgctcgagatgtttgccgcctccgcggac
gagttcaaggcgctgcgggagaaggaggaggcccagggacggaaagtcgcggcagaagag
atggcgggggatgggttccaggttgtctacggcaagaagaagaagaaggtgggtatggga
gaggaaggagttggcagaagtgaggcctttggatcttctggttcggtgaggatggccacc
atggatagggctgcagcatcagggccaaagccgaaggtgcccttccacatccccaccatc
ccacgcccacaggacgtgcaccgcattgtggtggacaacacgagcaagccattcgaccat
accttccttgagcgcagcgatgacggtgcccgtgccatacacccactggaaaaactcccc
atggagcaactatttgacaggcgtgttcctggaagtgagccattagagccacctgcttta
gatgacaccccttttacatttgttgaagaccggaaaaccttggaagtgttggtgacaaag
ctgaagagtgcaactgagtttgctgttgatttggaacacaaccactataggtcttttcag
ggtctcacctgcctgatgcagatttcaactagaaccgaggactttattgtagacactctt
aagctccgcaattgtcttggtgagaacttgagagaagtttttcaagatccaactaagaag
aaggtaatgcatggggcaggtcgtgatataatatggcttcaaagagactttggaatatac
gtgtgcaaccttttcgacacagggcaggcttcaagaatcttacaaatggaccgcaacagc
ctggagcatcttctgcaatatttctgtggagtgacagcaaacaaagaatatcagagtgca
gattggaggctgaggccacttcctgatgaaatgaccaagtatgctagagaagatacacac
tatctgctctacatatatgacttgatgcgattgcgattggtgaatgagtcttcaggcgat
gatcttcttttggaggtttgcaagcgcagcaatggaatttgcttgcaactatatgagaag
gagctgctgactgattcatcatacctttacatacatgggttgaaagaaaatgacttgagt
gcaaggcagctggcagttcttgctggtctatatcaatggagagatggcgtcgctcgtgct
gaggatgagagcactggttatatattacccaataagactctacttgaaatagccaagcag
atgcctgtgaccactgggaggttaaaaagaacagtgaagtcaaaaaataaatttcttgag
cactatctcggacatgtcattactatcataaggaatgccgtcgcaaatgccgatgctttt
gaaagtatagctgagcaactgaagaagggaaggctggaagagttaatggcggcagaagcg
aaggacggcagtgaagacagtgaaatgattcctgccgtcgatgctgatagtaatgaaagt
aatcttcagctgattgctgaacctgatgtagctcccacagtgattacaaatgtccatact
gcttctttctgtaccgggaatgttacgagcggagcttctttaggtaatttgcaactagat
aacatcacacctgaaaccaggagctttggggcgttgccaggcgctaccgggcaagcagat
acagtgataccgagcaatggtggtggtcagcagcaagtaataaaggcaacagttcaagta
ttgaagagacctacggcttttggtgctctgttaggaaaaccctctaccgcaagaaggcca
aatctatttccaggattttcaagtgaccagaataaaagcaaggtggagaagatcaagtct
tccgtggtactgcctttccatcatttctcaggcggtgcaaatcccccagcaactagccct
ccagtagcaaaatcgtcggaacatgaagcagaaatcatgtgcgaggatcctgtgtctcgg
atggaggaagtgattcagctggacactggaacagatgacccagaaaacggcaacgcagat
ggacagagcgattgcaaacctggagacaccgatgtgtctagctcccctcctgagccttct
tctggcatcgagcagcgctgcagatccctcaacgagagcagagaccttcaacagaagcac
caagcaccggaagaactggaatttaatgatcagctgaaggccttcgattacgctgaagct
agaaagaatacttcatttggagaagttagatctgagagaagaaaggacaatgcagtggcc
agcgctatcaatgtggattctggagataaacggaaaagtttgaaacaaacccccggtgcc
ggtggcggcgaagaggatgaagggaacttccagaatccacgaaggcgacaggctttccca
ccttctggcaacaggagtgctacgtaccattag
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