Turicibacter sp. KK003: VXM77_00605
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Entry
VXM77_00605 CDS
T10570
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tuk Turicibacter sp. KK003
Pathway
tuk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tuk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VXM77_00605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tuk03400
]
VXM77_00605
Enzymes [BR:
tuk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VXM77_00605
DNA repair and recombination proteins [BR:
tuk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VXM77_00605
Prokaryotic type
VXM77_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Polysacc_deac_1
Motif
Other DBs
NCBI-ProteinID:
WWR13478
LinkDB
All DBs
Position
125277..125945
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AA seq
222 aa
AA seq
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MFIHNDWAPILEREFEKPYMKELFSKLHEQYEIETVYPPKKSVFRAFELTPYSAVKVVIL
GQDPYHGENQANGLSFSVTETTKIPPSLRNIFTELVSDIKCSYPTSGDLSKWAREGVLLL
NSTLTVRSGQPMSHASMGWERFTDHILSCLNEKDAPIVFILWGNHARSKKRLIDQRKHLV
LESVHPSPLSAHRGFFGSAPFSKTNEFLVSKGIHPIDWTLTK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
ttgtttatccataatgattgggcacctattttagaacgagaatttgaaaagccgtatatg
aaggagcttttttctaagctacacgaacaatatgaaattgagactgtttatccacctaaa
aagtctgtgtttagggcatttgaactcaccccttattcagcagtgaaggttgtgatttta
ggtcaggatccgtatcacggtgagaatcaggcaaatggtcttagtttttccgtaacagaa
acaacaaaaattccaccttcacttcgaaatatttttacggagttggtttcggatatcaag
tgttcttatccaacgagcggagatttaagtaaatgggcaagagagggggttttattgctt
aattcaaccttaacggttagatcaggccaaccgatgtcccatgcttcgatggggtgggaa
aggtttacagaccatattctaagttgtttgaatgagaaggatgcccctattgtttttatt
ttatggggaaatcatgcacggagtaaaaaaagattaatcgatcaaaggaagcatttagtg
ctagaatcggttcatccttctccattgtcggcgcatcgtggattcttcggaagtgccccc
ttttcaaaaactaatgaattcttagtttctaaagggattcaccctattgattggacctta
actaaataa
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