Turicibacter sp. KK003: VXM77_03395
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Entry
VXM77_03395 CDS
T10570
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tuk Turicibacter sp. KK003
Pathway
tuk03030
DNA replication
tuk03430
Mismatch repair
tuk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tuk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VXM77_03395 (dnaE)
03430 Mismatch repair
VXM77_03395 (dnaE)
03440 Homologous recombination
VXM77_03395 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tuk03032
]
VXM77_03395 (dnaE)
03400 DNA repair and recombination proteins [BR:
tuk03400
]
VXM77_03395 (dnaE)
Enzymes [BR:
tuk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VXM77_03395 (dnaE)
DNA replication proteins [BR:
tuk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VXM77_03395 (dnaE)
DNA repair and recombination proteins [BR:
tuk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VXM77_03395 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WWR13958
LinkDB
All DBs
Position
709323..712364
Genome browser
AA seq
1013 aa
AA seq
DB search
MAFTHLQVRSAYSLLNSSITIKDYVHLATRQGLKTLALTEDGSMHSAIKFYQECRVNNIK
PLIGLTVKVKLEMGTEEWTFLAKNQTGYEALLSLASLYALNDEGIEFEELLPYSNHLITI
TNGETGVFVSMVMDHQWENLNQYYQRYLKPFNHLYIGLLRVNQETYDCSCRLISFAKEKQ
LKMVAVNDVRYLNQEDAKTLTLLRAIKANQSVEQMQISDVERYFKTEEQMRQLFVDHEEA
IDHTEEIANACEVEILLHQSLLPTFKTPEGTTAATYLEALCYKGLLKRYGTSVSEIHKNR
LRYELETIRKMGFCDYFLIVWDFIRYAKMNQILVGPGRGSAAGSLVSYVLGITNVDPIKY
KLLFERFLNPERITMPDIDIDFQDNRRDEVIQYVQQKYGARCVVQIATFGTFQSRSAWRD
LARIHDVQTELINKVATYISSGQTLRETYEQSQPLKEFFLKYPKLEMIYQEAMKIEGLPR
HTSIHAAGVIIHDQDLTRHTAIMEGPTGIYVSQYEAEDLEAIGLLKMDFLGLKNLNMLQQ
MMTLIRKESDFQFDLASLDLNDSQTYKMITLGQTTGIFQLESEGMRQVLKKVRPNCLEDI
IACNALFRPGPMENIPLFAARKHKEARIEYLDPILEEILRDTYGIIVYQEQIMQIAHVVS
GYTLGEADVLRRAVSKKNKEILEKEERQFILRATQRGHSPEMAKKLYSLILKFANYGFNR
SHAVAYSLIAYQMAYLKAHYPAYFMSVALTNVIGSEHHTAIYIREAKQLDLTILPPSVNR
SGLTYQIENKCIRFSLLPIKHIGLNLAKQLVSIRENGAFKSVYDFVVRTRTFMNQRAYES
LIDAGALDEFGYNRATLHHNLTAILDFSKYDGGLFEPDFQMQIISKDFSKIDLMKREKEL
LGFYLNSHPIHLLQKVAKENGWYYPSEISSIRKTQATFVGFIEKFREIRDRHGKLMAFME
ITDENTSLTVTIFSDVYVSEYKRLLGKVIAVQGRISERNNEKNLNFIKIITIS
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcatttacgcatttacaggtgcgatcagcctattctttgttaaatagctcgataacg
ataaaagactatgtccatcttgcaacgagacaggggttgaaaacactcgctctgactgaa
gacggtagcatgcacagtgcgattaagttttaccaggaatgtcgagtgaacaacattaaa
ccattaattggattaactgttaaagtaaaactcgaaatgggaacggaggaatggacattt
cttgctaaaaatcagaccggttatgaggcgctcctgtcgttagcttctttatacgctttg
aacgacgaggggatagaatttgaagaactattgccttattcgaatcatttaatcacgatt
acgaatggggaaacaggggtatttgtttctatggtgatggatcatcaatgggaaaatctt
aatcagtactatcaacgctatcttaaaccgttcaatcatctttatatcggattgttacgt
gttaaccaagagacgtatgattgttcgtgccgcttaatctctttcgccaaggagaagcag
ctaaagatggttgctgttaatgatgtgcgttatttgaatcaagaagatgctaaaacgtta
actttactacgggctattaaggcgaatcaatcggtggagcaaatgcagattagtgatgtg
gagcgttactttaagacggaggaacagatgcgtcaattattcgtcgatcacgaagaggcg
attgatcatacagaagagattgctaacgcatgtgaggttgaaatattgctccatcagtcc
ttattgccaacgtttaaaacacccgagggaacgacagcagccacttatttagaggcgcta
tgctataaagggttgcttaaacgatacggaacatcggtgtcagaaattcataaaaatcga
ttgaggtatgagttagaaaccattagaaagatgggattttgcgactactttttaattgtt
tgggattttattaggtatgccaagatgaatcaaatcttggttgggcccggaaggggatca
gctgcggggtcgcttgtttcctatgttttgggaattacaaatgttgatccgattaaatat
aagttgttgttcgaaaggtttttaaaccctgaacgtattacgatgcccgatattgatatt
gattttcaagataatcggcgtgatgaagttattcaatatgttcaacaaaagtacggagca
agatgcgtggttcaaattgcaacgtttggaacgtttcagtcacggtcggcgtggcgtgat
ttggcccgcatccatgatgtacaaactgaattgattaacaaggtagctacctacatttcc
tcggggcagacgcttagggaaacgtatgagcaaagtcaaccgttaaaggaatttttctta
aaataccctaaacttgaaatgatttatcaagaggcgatgaaaatcgagggattacctcgc
catacttcaattcatgctgcgggagtcattatccatgatcaggatttaactagacacacc
gctatcatggagggaccaacaggaatttacgtttctcaatacgaggctgaggatttagag
gcgattggactacttaaaatggactttttagggttgaagaatcttaatatgttacagcag
atgatgacgcttattagaaaggaatctgattttcagtttgacttagcctcattggattta
aatgattcacaaacgtataaaatgattacacttggtcagacaaccggaatttttcaatta
gagtcagaggggatgcgtcaagttcttaaaaaagtacgtcctaattgcttagaggatatt
atcgcttgtaatgccttattcagaccgggtccgatggagaatattcctctgtttgcggcg
agaaagcacaaggaggcacggattgagtatttagatcctatcctggaagaaattttacgg
gatacgtatggaattattgtatatcaagaacaaattatgcaaatcgctcacgtcgtttca
gggtatacattaggagaggctgatgtattgcgtcgtgcggtttctaaaaaaaataaagag
attttagaaaaagaggagagacaatttattttaagggccactcaaaggggacactcacct
gaaatggctaagaagttatattcacttattctaaaatttgcaaattatggctttaaccgt
agccatgcagttgcctatagtttaatcgcttatcaaatggcgtacttaaaggcacattat
cctgcttactttatgagcgtcgctttaacaaatgtgattggaagtgagcaccacacagcg
atttatattcgtgaagccaagcaattagatttaactattttgcccccgtcagtaaataga
agtggactcacgtatcaaattgaaaataaatgtattagatttagcctccttccaatcaaa
cacatcggattaaatttagccaaacaactcgtctctattcgtgaaaatggcgcgtttaaa
tcagtgtatgattttgtggttagaacgcgaacttttatgaatcaaagggcatatgaaagt
ttaattgacgcgggggcattagatgagtttggatacaatcgcgcgacgcttcatcacaat
ttaacggcaattctcgatttttctaaatatgacggtgggttatttgaacccgattttcaa
atgcaaattatttcgaaagattttagtaaaattgaccttatgaaacgtgaaaaggagtta
cttggattttacttgaactctcaccctattcatttattgcaaaaggttgccaaggaaaac
gggtggtattatccaagcgaaatctcttcgataagaaagactcaggctacttttgttgga
tttattgaaaagtttcgagagattagggatcgtcatggaaaattgatggcctttatggaa
ataacagatgaaaatacctcattaacggtgacaattttttcggatgtttacgtgagtgaa
tataagagacttttaggaaaagttatcgctgtacagggacgaattagtgaacgaaataat
gaaaaaaatcttaactttattaaaataataacgatttcataa
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