Turicibacter sp. KK003: VXM77_04485
Help
Entry
VXM77_04485 CDS
T10570
Name
(GenBank) S1 RNA-binding domain-containing protein
KO
K02945
small subunit ribosomal protein S1
Organism
tuk Turicibacter sp. KK003
Pathway
tuk03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tuk00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
VXM77_04485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tuk03011
]
VXM77_04485
Ribosome [BR:
tuk03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
VXM77_04485
Bacteria
VXM77_04485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
PCB_OB
EXOSC1
RRP4_S1
Motif
Other DBs
NCBI-ProteinID:
WWR14108
LinkDB
All DBs
Position
876989..878653
Genome browser
AA seq
554 aa
AA seq
DB search
MKQNPEEMTMSEVLSMANFDLPAVNDVIEGEVVRVTNQEVTVDIHGATEGTIYLNELTLD
KVDSAKDVVKIGDKIKAMIKKVDDEQILLSRRALLEYERFQELKTAFEKGETLVAKVERV
VKGGLIVNIGLEAFLPANMIDVKYVSDLNQYVSQEIPVRIVEFNARNRKIKVSRKMVIAE
QLKAARDEQFSTLALGEIVEGEVVRIEKYGAFVRFGSLEGLVHISEISHLPVANVEDALT
VGQKVSAKVIKIDGTKLQLSIKATLMTPFEQFASTHQVGDVLDGQVVRLMDFGAFVEVAA
GVEGLVHLSELSWDHKAKLDEVVSEGQTVRVRILSMDNKNHRLALSIKQVEQDPWVAFGH
QVGDVIKGQVTNVTDLGAFIKVAPYIEGLCHYTEASWNPQMKLASMVAPMDEVEVKIISL
DAKKHRLGLSLRQVKSNPWESVTFKTLDVVKGTVVATNDRGAFVAVEEDVVGFLPMNQIT
EKRISRVEDVLTVGQEVEVKVTRFEPKQFKLELSIRRIVEDAEREEFNNYMQKQEAMENE
TLGDLFGDALKNLL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaatccagaagaaatgacgatgagtgaagttctatcaatggctaattttgac
ttaccagcagtgaatgatgtcattgaaggtgaagttgttcgtgtaacaaatcaagaggtt
acggttgatattcatggagcaacagaaggaacgatttatttaaatgaattaacattagat
aaagtggattctgccaaagatgtagttaaaatcggtgataaaataaaagcgatgattaag
aaagttgatgacgagcaaattttattatcgcgccgtgctttacttgaatacgaacgtttc
caagaattaaaaacggcttttgaaaaaggtgaaacattagtcgcgaaagtagaacgtgtt
gttaagggcggtttaattgtaaatattggattagaggcgttcttaccagctaatatgatt
gatgttaaatacgtttctgacttaaatcaatacgtttcacaagagattcctgtgagaatt
gttgaatttaacgctcgcaaccgtaaaattaaagtatcacgtaaaatggtgattgcagaa
caattaaaagcggcacgcgatgaacaattttcaacattagcacttggagaaatcgttgaa
ggtgaagttgttcgtatcgaaaaatatggggcattcgttcgctttggttcgttagaagga
ttagttcatatttctgaaatttctcatttaccggtggcaaatgttgaggatgccttaaca
gtcgggcaaaaggtatctgcgaaagtcattaaaattgatggaacaaaattacaattatca
attaaggcaactttaatgacgccatttgaacagtttgcttcaacacaccaagttggagat
gtattagatgggcaagtggtccgtttaatggattttggagcctttgtagaagttgcagca
ggtgttgaagggttagttcatttatctgaattatcatgggatcataaggcaaaattagat
gaggtagtgtcagaaggtcaaactgttcgcgttcgtatcctatcgatggataataaaaat
catcgccttgccttgtcaattaaacaagtagagcaagacccatgggtggcgtttggtcat
caggttggggatgtaattaagggacaagtaacgaatgtgacagatttaggagcatttatt
aaagtggctccatacattgaaggattatgtcattacacagaggcatcatggaatcctcag
atgaaattggcatcgatggtagctccaatggatgaagtggaagttaaaattatttcatta
gatgcgaaaaaacatcgcttaggattatcgttacgtcaagtgaaatcaaatccttgggaa
tcggtaacgtttaaaacattagatgttgtgaaaggaacggttgtggcgactaatgaccgc
ggagcattcgttgcagtcgaagaagatgtagttggttttctaccaatgaatcaaatcacg
gaaaaacgtatttctcgtgtggaagacgtattaacagttgggcaagaagtcgaggttaaa
gtcactcgttttgaacctaaacaatttaaattagaattaagcattcgccgtattgttgaa
gatgcagaacgtgaagaatttaataactatatgcaaaaacaagaggcgatggaaaacgaa
acattaggggacttattcggggatgcattaaaaaatttattataa
DBGET
integrated database retrieval system
