Turicibacter sp. KK003: VXM77_10605
Help
Entry
VXM77_10605 CDS
T10570
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
tuk Turicibacter sp. KK003
Pathway
tuk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tuk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VXM77_10605 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tuk03400
]
VXM77_10605 (uvrA)
DNA repair and recombination proteins [BR:
tuk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VXM77_10605 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VXM77_10605 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_21
AAA_16
nSTAND1
DnaJ_CXXCXGXG
nSTAND3
AAA_25
Mtrc-MtrF_II-IV_dom
APS_kinase
Viral_helicase1
cobW
BCA_ABC_TP_C
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WWR13110
LinkDB
All DBs
Position
complement(2182518..2185358)
Genome browser
AA seq
946 aa
AA seq
DB search
MNDKIIVKGAREQNLKNIDVEIPRNQLVVLTGLSGSGKSSLAFETIYAEGQRRYVESLSA
YARQFLGNMEKPDVDSIEGLSPAISIDQKTTNRNPRSTVGTVTEIYDYLRLLFARIGKPT
CPVHGIEIQAQSIEQMVDRLYQYEERTRMQILAPVIVGKKGSHVKTLEGLKKDGYVRVRV
DGEMLDLDDEIKLNKNKKHTIEVIVDRISLKPDTRSRVADSLETALKLGAGKVLIDVVGR
EELIFSEHFSCPYCDFSVDELEPRMFSFNSPFGACPECSGLGVQKKIDIDLLVPDQRLSI
SQGAIRGWEKEETHGRKLLDTVCQHYGIDLDKPFEELSDEEKNIIFYGTSEPIHFQLQSE
SGVKHEKVDTYEGVINNLERRYMETSSSFMREWIEGFMSELKCNRCHGKRLSEQALSVLI
DGKNIDDFTELSIQEALDFIQELRLSEKDLKIAHLILKEIKERLLFLVNVGLDYLTLNRS
AGSLSGGEAQRIRLATQIGSRLSGVLYVLDEPSIGLHQRDNDRLIDTLKSMRDLGNTLIV
VEHDEDTMMACDYLIDIGPGAGIHGGEIVAQGTPEEVMQNDHSITGQYLSGKKQIYLPKE
RRKGNGQFIEIKGAKENNLKNINLKIPMGILNVVTGVSGSGKSTLINDILYRSIASKLYR
IKDKPGEHKELKGMEYIDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDLFASTNEAKVRG
YQKGRFSFNVKGGRCESCHGDGVLKIEMHFLPDVYVPCEVCHGKRYNRETLVVTYRGKNI
SDVLDMTVEDAYIFFEHHPKIARKLKTLSDVGLGYLKLGQPASTLSGGEAQRVKLASELH
RRITDKTVYILDEPTTGLHIEDVKRLLKVLNRMIDEGATIVVIEHNLDVIKMADYIIDLG
PEGGTRGGTIVAKGTPEEVAKVPESYTGKYLNKILVRDRERQKNLS
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaaaattattgtaaaaggtgcacgtgaacagaatttaaaaaatattgatgtt
gaaatcccacgtaatcagttagttgtattgactggtttatcggggtctggaaagtcctct
cttgcatttgaaacaatttatgctgagggacaaaggcgttatgtagagagtttatcagcc
tatgcaagacagtttttaggtaatatggaaaaaccggatgttgattcaattgaagggttg
tctccggctatttcgattgatcaaaagacgacgaatcgtaatccaagatcaaccgtcgga
actgtaacggaaatctatgattatcttcgcttattgtttgcaaggattggtaaacccact
tgtcctgttcatggaattgagatacaggcgcaatcgattgagcaaatggttgatcgccta
tatcagtacgaggaacggacaagaatgcaaattttagctcccgttattgtcggtaaaaag
ggtagtcacgtcaaaacgcttgaaggattaaaaaaagatggatatgtacgtgtacgtgtt
gacggagagatgctggatttagatgatgaaattaagttaaataaaaataaaaagcatacg
attgaggttatcgttgaccgcatttcattaaagccagatactcgttcaagggttgcggat
tcattagaaactgctttgaaacttggagcaggtaaagtattaattgatgttgtaggccgt
gaagaattaatctttagtgagcacttttcgtgtccttattgtgatttctccgtcgatgaa
cttgagccgcgcatgttctcatttaattctccttttggtgcttgtcctgagtgtagtggc
ctaggggtacaaaagaaaattgatattgacctattagtcccagatcagcgattatctatt
agtcaaggggctattcgtggatgggaaaaagaagaaactcatgggcgtaagttattagat
accgtatgtcaacattatgggattgatttagataaaccatttgaagaattgagtgacgag
gaaaagaacattattttttatggaacatcagagcctattcattttcaacttcaatcagag
agtggagttaaacatgagaaggtggatacttacgaaggggttattaacaatttagaacga
agatatatggaaacgagctcttcatttatgcgggaatggattgaagggtttatgtctgaa
ttaaaatgtaatagatgtcatggaaaacgactctctgaacaagcattatccgtattaatt
gatggaaaaaatattgatgactttacggaattatcgattcaggaagctttagattttatt
caggagttaaggttaagtgaaaaggatttaaagattgcccatttaattttaaaagagatt
aaggagcgtttgctcttcttagttaatgttggtttagattatttaactttaaatcgttcc
gcgggttccctgtcaggaggagaagctcaaaggattcgattagctactcaaattgggtca
cgcctatcaggagttttgtatgtgttagatgaaccttctattggtcttcaccagcgggat
aatgatcgattaattgataccctaaagtccatgcgggatttaggaaatacgttaattgtt
gttgagcatgatgaagatacgatgatggcgtgtgactatttaatcgatatcggtcccggt
gcaggaatacacggtggggaaatcgtagctcagggaacaccagaagaagttatgcaaaat
gatcattcaattacaggtcagtatttgagcggtaaaaagcaaatctatttaccaaaggaa
cgtcgaaaaggaaatggacaatttatagagataaagggtgcaaaggaaaacaatcttaaa
aatattaacctaaaaattccgatgggaattttaaatgtggtgacgggcgtatcagggtca
ggaaaatcaacgcttattaatgatatattatatcgttccattgcctctaagctttatcgg
attaaggataagccgggtgaacataaggagttaaagggcatggagtatattgataaaatc
attgatattgatcaatcaccgattggtcgaacgccacgttcaaatcctgccacttatacg
ggagtttttgatgatattagagatctttttgcgtcaactaatgaggcaaaggttcgagga
tatcaaaaaggccgtttttcgtttaatgtgaaaggcggaagatgcgaatcttgtcatggc
gatggcgtattaaaaattgaaatgcattttctaccagatgtttatgtgccttgtgaagtt
tgccatggaaaacgttacaatcgtgagacacttgtggttacctatagaggaaaaaatata
tcagatgtattagatatgacagtcgaggatgcttatatattttttgaacatcatccgaaa
atagcacgaaaattaaaaacactttctgatgtaggattaggttatttaaaattaggacag
cctgcatcgaccctatctgggggagaagcacaacgtgtgaaattagcatccgaattacat
cgtcgtattacggataaaacggtttatattttggatgaaccgaccacggggttacatatc
gaggatgtgaaaagactgttaaaagttttaaatcgcatgattgacgaaggtgcaacgatt
gttgtgattgagcacaatttagatgttatcaaaatggctgattatattattgatttaggt
ccagaaggcggaacaaggggcggaactattgtggctaaaggaaccccggaagaggtggct
aaggtaccagaatcatatacgggtaaatacttaaataaaattttagtacgtgatcgggaa
agacaaaaaaatcttagttaa
DBGET
integrated database retrieval system
