Turicibacter sp. KK003: VXM77_10625
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Entry
VXM77_10625 CDS
T10570
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tuk Turicibacter sp. KK003
Pathway
tuk03420
Nucleotide excision repair
tuk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tuk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VXM77_10625 (pcrA)
03430 Mismatch repair
VXM77_10625 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tuk03400
]
VXM77_10625 (pcrA)
Enzymes [BR:
tuk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VXM77_10625 (pcrA)
DNA repair and recombination proteins [BR:
tuk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VXM77_10625 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
VXM77_10625 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_14
ResIII
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
WWR13114
LinkDB
All DBs
Position
complement(2190668..2192890)
Genome browser
AA seq
740 aa
AA seq
DB search
MNQLLHNMNPQQKEAILTTEGPLLVMAGAGSGKTRVLTHRIAYLMSEKQVSPYNILAITF
TNKAAREMKERVEKLIGERGKDVWISTFHSMCVRILRRDIDLIGYDLNFGILDDADQLSV
IKTVMEDLNLDPKRQSPKYFLSQISNAKNELKSPRDLSKEFENEDVIRVYERYQQILFKN
NRVDFDDLLVLTVHLFEKHPEVLTFYQNKFQYIHIDEYQDTNNAQYQIVSLLAQKFRNIC
VVGDSDQSIYSWRGANIENILSFEHDYPDAKVVLLEQNYRSKQMILNAANDVIQNNSGRL
DKRLWSDRGEGNQIEYYRALDGDVEATYIADKISYMRRDSYDYHDFAILYRTNSQSRAIE
QAFLRQNIPYRLIGGQSYFKRKEIKDLMAYLRLICNPDDDLSFKRIVNEPKRGIGAASIE
KLTQFANEAELSLMASIDEVDNGIARATLNKFIDFKQMIYMLRSQIEAYSIAEFIDLVLR
QTGYLEMLENENTIEADSRIDNLGEFQSMATQFEEVDLNEILAEEESEERADELSTMTKL
VILLNDLMLQTDTETEEEANESKVTLMTIHAAKGLEFPVVFICGFEDGIFPLHSALEQGG
DELEEERRLAYVAITRAEDILFITNAQSRYQYGRRSANRESMFIHEISDKYLNKTGIETR
SKRPSFTLQEALDNRSPKKTIQTITLTTDSSWKSGDKVLHDSFGEGVVVGVKGEIVSIAF
SSPHGIKKLMGSHPALKKRG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaattactacataatatgaaccctcaacagaaagaggcaattttaacaactgag
ggaccgcttttagtgatggccggggcgggatctgggaaaacccgtgttttaacccatcga
atcgcttatttaatgtcggaaaagcaggtttctccttacaatattttggcgataactttt
acgaataaggcagcaagagagatgaaggaacgcgtagaaaaactaattggggaacgcgga
aaagatgtatggatttctactttccattcgatgtgtgttcgtattctgaggagagatatt
gatttaattgggtacgatttgaattttggaattttagatgatgcggatcaattaagtgtg
ataaagactgtaatggaagatttaaatcttgatcctaagagacaatctccaaaatatttt
ttatctcaaattagtaacgctaaaaacgaacttaaatctccacgtgatttgagcaaagaa
tttgaaaatgaagacgtaattcgtgtatatgaaagatatcaacagattttatttaaaaat
aatcgtgttgattttgatgatttattagtgcttacggtccacttatttgaaaagcatccg
gaagtgttaacattttatcaaaataagtttcagtatattcacattgatgagtaccaagat
acgaataatgcacaatatcaaattgtttcattattggctcaaaagttcagaaacatctgc
gtcgttggcgattcggatcaatctatctacagttggcgcggagcaaatattgaaaatatt
ttatcatttgaacacgattatcctgatgcaaaggttgtattattagagcaaaattatcgt
tcaaagcagatgattcttaatgcagcaaatgatgtgattcaaaataatagtggccgcctg
gacaaaagattatggtccgatcgtggtgaagggaatcaaattgaatattatcgagcgcta
gatggggatgttgaggcaacctatatcgcggataaaatttcatatatgcgccgagatagt
tatgattatcatgatttcgctattttatatcgcacaaattcacaatcacgagcgattgaa
caggcatttttaagacaaaatattccgtatcgtttaataggaggacagagttattttaaa
cgaaaagagattaaagatttaatggcttatttacgtttaatttgtaatcctgatgatgat
ttatcatttaaacgtatcgtcaatgagcctaagcgtggaattggtgcagcttcaattgaa
aaattaactcagtttgcgaatgaggccgaattatcattaatggcttcaattgatgaggtt
gacaacggcattgcccgagcaactttaaataaatttattgattttaaacagatgatttat
atgctacgttctcaaatcgaagcttactctatcgcggaattcattgatttagttttaaga
caaactggatatttagagatgcttgaaaatgaaaacacgattgaggcggatagccgtatt
gataacttaggtgagtttcaatcgatggcgacccagtttgaagaggtagatttaaatgaa
attttggctgaggaagagagtgaggaacgcgctgatgaactctcaactatgactaaactt
gtcatattacttaatgatttaatgcttcaaaccgataccgaaacggaagaggaggcaaat
gaatccaaagttaccttaatgacgattcacgcggctaagggattagagtttccagttgtg
tttatttgcggatttgaagatggaattttcccattacattcggctttagaacaaggagga
gacgaacttgaagaagagcgacggttagcatacgtagctattactcgtgcggaagacatt
ttatttattacaaatgcacaaagtcgctatcagtatggtcgacgttccgcaaatcgagaa
tcgatgtttattcatgaaatatctgataagtatttaaataaaacaggaatcgaaactcgt
tcaaaacgcccatcatttacgttacaggaagcactagataatagaagtccgaaaaagact
atccaaacgataaccctcacaacagattcatcttggaaaagcggggataaggttttacat
gatagttttggagaaggagtcgttgtcggagttaaaggtgaaattgtttcgattgcattt
agttccccacatgggataaaaaaattaatgggatcacatcccgctttgaaaaaacgagga
taa
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