Turicibacter sp. KK003: VXM77_12010
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Entry
VXM77_12010 CDS
T10570
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tuk Turicibacter sp. KK003
Pathway
tuk00260
Glycine, serine and threonine metabolism
tuk00460
Cyanoamino acid metabolism
tuk00630
Glyoxylate and dicarboxylate metabolism
tuk00670
One carbon pool by folate
tuk00680
Methane metabolism
tuk01100
Metabolic pathways
tuk01110
Biosynthesis of secondary metabolites
tuk01120
Microbial metabolism in diverse environments
tuk01200
Carbon metabolism
tuk01230
Biosynthesis of amino acids
tuk01240
Biosynthesis of cofactors
tuk04981
Folate transport and metabolism
Module
tuk_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
tuk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VXM77_12010 (glyA)
09102 Energy metabolism
00680 Methane metabolism
VXM77_12010 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VXM77_12010 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VXM77_12010 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VXM77_12010 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VXM77_12010 (glyA)
Enzymes [BR:
tuk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VXM77_12010 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_5
RPC5_C
Motif
Other DBs
NCBI-ProteinID:
WWR13337
LinkDB
All DBs
Position
complement(2457110..2458339)
Genome browser
AA seq
409 aa
AA seq
DB search
MKDQAIFNALAQELKRQRENVELIASENYVSQEVMDVQGSILTNKYAEGYPSKRYYGGCE
FVDRVEEIARERAKQLFGAKFVNVQPHSGSQANMGAYRAILKPGAKVLGMNLSHGGHLTH
GHPLNFSGKDYEFYEYGVDEKTEMINYEVVRQIALDVKPQLIVAGASAYPRLIDFKKFRE
IADEVGAYLMVDMAHIAGLVAAGVHPNPVEFAHVVTTTTHKTLRGPRGGMILTNDEEIAT
KLDKVVFPGIQGGPLMHVIGAKAVSFFEALSDEFVDYQKQVVKNAKVLSDELTKHGLRIV
SGGTDNHLLLVDVKSSFGLTGKVAEAVLDRVAITCNKNTIPFDTEKPFVTSGIRLGTPAI
TTRGFKEAEMVELAGYIARALRSVDDEKELEAIRESVLQLTSRFPLYDA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatcaagcgatttttaatgccttagcgcaagagttgaagcgtcaacgtgaaaat
gtagagttgattgcttcggagaattacgtgtcacaagaagtgatggatgttcaaggttct
attttaacgaataagtatgccgagggatatccatcaaaacgatattatggcggatgcgag
ttcgttgatcgtgttgaagaaattgcgcgtgaacgtgcaaaacaactatttggagcaaag
tttgttaatgttcaacctcattcaggttctcaggcaaatatgggagcgtatcgtgcgatt
ttaaaaccaggtgcaaaagtgctaggtatgaatttaagtcatggagggcatttaacacat
ggccaccctcttaacttttcaggaaaagattatgagttttatgagtatggtgtagatgaa
aaaacagaaatgattaattatgaagttgtgcgtcaaatcgccttagacgtaaaaccacaa
ttaattgtagcgggagcttcggcgtatccacgtcttattgattttaaaaaattccgtgaa
attgcggacgaagttggagcatatttaatggtggatatggcccacattgctggattagtt
gcagccggtgtgcatcctaatccagtagagtttgctcatgttgtcacgacgacgacgcat
aaaacattacgtggtcctcgtggaggaatgattttgacaaatgatgaagaaattgcgaca
aaattagataaagtagtgttccctggtattcaaggtggcccattaatgcatgtaattggt
gcgaaggctgtctcgttttttgaagctttgtcagatgagttcgtggactatcaaaaacaa
gtcgtaaaaaatgcaaaggtcttgtctgatgaattaacgaaacatggtttacgtattgta
tcaggaggaacagataatcatttgcttcttgttgatgtaaaatctagttttggtttaact
ggaaaagtagcggaagccgttttagatcgagtggcgattacgtgtaataaaaatacgatc
ccatttgatacggagaaaccttttgtgacgagtggtattcgtttaggaacgccagcgatt
acaacgagaggatttaaagaggctgaaatggtggagttagcgggatatatcgcaagagct
ttacgttcagttgatgatgagaaagagttagaggctattcgtgaatctgttcttcagtta
acgagtcgctttcctttatatgatgcctaa
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