Tumebacillus avium: CBW65_06150
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Entry
CBW65_06150 CDS
T04874
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
tum
Tumebacillus avium
Brite
KEGG Orthology (KO) [BR:
tum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tum03019
]
CBW65_06150
Enzymes [BR:
tum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CBW65_06150
Messenger RNA biogenesis [BR:
tum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CBW65_06150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
ResIII
Flavi_DEAD
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ARU60714
UniProt:
A0A1Y0IMY2
LinkDB
All DBs
Position
complement(1337842..1340292)
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AA seq
816 aa
AA seq
DB search
MLTLPIDAVLPALQATLRTRENAVLVAAPGAGKTTRVPLALLGEAWLQGKKIVMLEPRRL
AARAAAAFMARQLGEQAGETVGYRVRMDTKVGPKTRIEVITEGVLTRMLQNDPALEDVGI
VIFDEFHERNLHGDLGLALCLQSQQLLREDLRVLVMSATLEAEPVAALLGDAPVLKSEGR
AFPVETRFLERRAEGRIEPVAVRTIKEALAAEEGDLLVFLPGAGEIRRVESLLHEQGLGR
GVKIMPLHGTLAREAQDAAIAPSIPGERKIVLATSIAETSLTVEGVRVVIDSGLMRVPRF
SPRTGMARLETVTVSRASAEQRRGRAGRVAPGVCFRLWTEHEDKGLPVRSTPEILEADLA
PLALELAVWGVTDPADLAWMDAPPAAAFSQARELLVQLGALTETGALTEHGKRMAEFGLH
PRLAHMVLKAVPLQLGGLACELAAVLKERDFLKDRDADLRLRIEALRAGHADRRMVAEAN
QWKRTLGLKAEEKANLAHLGLLLAFAYPDRIAQRRGNGRFLLRNGRGAAFVDAQPLSFVP
YLVAAELDDHGAESRIFLAAEIEESQLREHFPEQIRTEHIIEWEPAAQAVRSRNREKLGA
LLLKESPLHNPGAEEVLAALIKGVAAEGLDILPWTKAARQFQERLAFMHRHDPSWPDVSR
AGLTETLEDWLAPHLYGLKNRDDLQRLHLISILENMLSWDQRRELDDHAPTHLTVPSGSR
IPIDYSDGDAPVLAVRLQEMFGLKETPRIAHGRVPLTLHLLSPAHRPVQVTRDLASFWQN
AYFEVKKDLKGRYPKHHWPDDPYSAVPTNRAKPRGT
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccttaccaatagatgcagtgctccctgcacttcaagcgaccctgcgcacgcgg
gaaaatgccgtgctggtcgcagcgcctggggcggggaagacgacgcgggtgccgctggcg
ctgctcggggaagcttggctgcaagggaaaaagatcgtcatgcttgaaccgcgccgtctg
gccgcgcgggctgcggcggcgtttatggcgcgtcagcttggcgaacaagcgggggaaacg
gtcggctaccgggtgcggatggatacgaaagtcgggccgaaaacgcggatcgaagtgatc
accgaaggcgtcttgacccgaatgctgcaaaacgacccggcgctggaagacgtcggcatc
gtgatctttgacgagttccatgagcgcaacctacacggcgatctcggactggctctgtgc
ctgcaatcgcagcaactgctgcgcgaagacctccgcgtgctggtgatgtcggcgacgctg
gaagcggaaccggtcgccgcgctgcttggcgacgcgccggtgttgaaaagcgaaggtcgc
gccttcccggtggaaacgcggtttctcgaacgccgcgccgaagggcggatcgaaccggtc
gcggtgcggacgatcaaagaagcgctggcggcggaagaaggcgacctgctcgtctttttg
ccgggagcgggcgagattcggcgcgtcgagtcgctgctgcacgagcaagggcttgggcgc
ggcgtgaagatcatgccgctccacggcactttggcgcgggaggcgcaggatgcggcgatc
gcgccgagcatccccggcgagcgcaaaatcgtgctggctacctcaatcgccgagacgagc
ttgacggtggaaggcgtgcgagttgtcatcgacagcggattgatgcgcgtgccgcgcttt
tcacctcggacaggcatggcacggctggagacggtcacggtgtcgcgtgcgtcggccgaa
cagcggcgcggccgggccggacgcgtggctccgggcgtgtgcttccgcttgtggacggag
catgaggacaaagggctccccgtacgcagcacgccggagattctggaggcggacctcgct
ccgctggctttggaactggcggtgtggggcgtgaccgatccggccgatctggcgtggatg
gatgcgccgcccgcagcggctttttcgcaagcgcgggaactgctcgtccagctcggcgcg
ctgaccgaaacgggggcgctgaccgaacacggcaaaagaatggcggagtttggcttgcac
ccgcgcctggcgcacatggtgctgaaggcggtgccgttgcagcttggcgggctggcctgc
gaactggcggcggtgctgaaggagcgggattttctcaaagaccgagacgccgacctgcgc
ctgcgcatcgaagcgctgcgtgccgggcatgctgaccgccgcatggttgccgaagcgaac
cagtggaagcgcacgcttggcctgaaagcggaggaaaaagcgaatctggcacacctcgga
ctcctgctcgcgtttgcctaccccgaccggatcgcgcagcggcgcgggaacgggcgcttt
ctgctgcgcaacgggcgcggggcggcgtttgtcgatgcccaacccctgtcgtttgtcccg
tacctcgtcgcggccgaactggacgaccacggggcagaaagccggattttcctcgccgca
gaaatcgaggagtcgcaactgagagaacatttccccgagcagatccgcactgagcacatc
atcgagtgggagcccgccgcacaagcggtgcggtcacgcaatcgggagaagctcggggcg
cttttgctgaaggaatcccctctgcacaaccccggcgcggaagaggtgctggcggcactg
atcaaaggggtcgcggcggaaggcctggacatcctgccgtggacaaaagcggcccggcag
ttccaagagcgcctcgccttcatgcaccgccacgacccgtcctggccggatgtgtcgcgg
gcagggctgaccgaaaccttggaagactggctggccccgcacctctatgggttgaaaaat
cgcgatgacctgcagcggctgcacctgatctccattttggaaaacatgctctcgtgggac
cagcgccgcgaactggacgatcatgcgccgactcatttgacggtgccaagcggttcgcgc
atcccgatcgactacagcgacggggacgcgccggtgctggccgtccgcctgcaggagatg
tttggcctgaaagagacgccgcgcatcgcgcacggacgcgtgccgctgaccttgcatctg
ctctctccggcgcatcgtccggtacaggtgacgcgcgatctggccagcttttggcaaaac
gcttacttcgaggtgaaaaaagacctcaaaggccgctaccccaagcaccactggccggac
gacccatacagcgccgtgccgaccaaccgggcgaaaccgcgcgggacgtaa
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