Tumebacillus avium: CBW65_13585
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Entry
CBW65_13585 CDS
T04874
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tum
Tumebacillus avium
Pathway
tum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBW65_13585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tum03019
]
CBW65_13585
03009 Ribosome biogenesis [BR:
tum03009
]
CBW65_13585
Enzymes [BR:
tum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CBW65_13585
Messenger RNA biogenesis [BR:
tum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CBW65_13585
Ribosome biogenesis [BR:
tum03009
]
Prokaryotic type
rRNA helicases
CBW65_13585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
UBA_NBR1_C
DUF4240
CMS1
Motif
Other DBs
NCBI-ProteinID:
ARU61945
UniProt:
A0A1Y0IR68
LinkDB
All DBs
Position
2842416..2844176
Genome browser
AA seq
586 aa
AA seq
DB search
MATFQELNIREDIMKSLEEMGFEQATPIQTETIPIALAGDDVIGQAQTGTGKTAAFVIPT
LSRIDMDKKAIQVLVMAPTRELAIQVSEETSRLGKYSRVNVVPVYGGQPIDRQIKALKRN
PQMIIGTPGRLLDHIRRKTVNLSEVQVVILDEADEMLDMGFLEDIESILAEIPTQRQTLL
FSATMPDPIRRLAERFMHSPKVVKIQPQGVTAPKIAQIYYEVAEKNKVDALTRLLDVESP
ELGVIFCRTKKGVDELQRVLQSRGYLAAGLHGDMTQRERDQVMHTFRQSTIDLLIATDVA
ARGLDVEGVTHVFNYDIPQDVDSYVHRIGRTGRAGREGKALTLITPREFKLLRMIETAIG
KRIHKSLLPTLMELKERQQARIMEKLLGEIEETGTSQFEELASELLAQHNSVAVLAAALK
IIGDDLVGDQELSSIDMSLSEVVDFSKRFREQRGTTGGGGGYGNRGGGGGYGNRGGGGGY
RGGGDRRSGGGGYKKGPGGGGGGYSKDRRASGGGTGTGTGGSSYGNREGGGYGEKRGGGY
GEKRSGGYGNREGGGYGNREGGGYGNREGNREGSRDGGGGRRRTHF
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatttcaagagctgaatatacgagaagacatcatgaaatccctggaagaaatg
ggttttgagcaagcgaccccgatccaaacggaaacgattccgatcgccctcgcaggggac
gacgtaattggtcaggcacaaacgggtacgggtaaaaccgcagcctttgtcatcccgacc
ttgtcgcggatcgatatggataaaaaagcgattcaggtgctggtcatggccccgactcgc
gagcttgcgatccaagtatcggaagagacttcccgacttggcaagtactcccgcgtaaac
gttgtgccggtctatggcggtcaaccgatcgaccgtcagatcaaagcgctgaagcgcaac
ccgcagatgatcatcggtacgccgggacgtctgctcgaccacatccgccgcaagacggtc
aacctgagcgaagtacaggttgtcatcttggacgaagcggatgaaatgctcgacatgggc
ttcctcgaggacatcgaatcgatcctcgcagagatcccgacccagcgccagaccctgctg
ttctcggcgaccatgccggacccgatccgccgtctggcggagcgcttcatgcactccccg
aaagtggtgaagatccaaccgcaaggcgtgactgcgccgaagattgcgcagatctactat
gaagtcgcagagaaaaacaaagttgatgcgctgactcgtctgctcgatgttgagtccccg
gagcttggcgtcatcttctgccgcaccaaaaaaggcgtagacgagctgcagcgcgtcctg
cagagccgcggctacctggcagctggtctgcacggcgacatgacccagcgtgaacgcgac
caggtcatgcacaccttccgtcagagcacgatcgacctgttgatcgcaaccgacgttgcg
gcacgcggtctcgacgtcgaaggcgtcacccacgtcttcaactatgacatcccgcaggac
gtcgactcctacgtccaccgcatcggccgtacgggccgtgctggccgtgaaggcaaggcg
ctgaccctgatcaccccgcgtgagttcaaactcctgcgcatgatcgagacggcgattggc
aagcgcatccacaagtccttgctgccgactttgatggagctcaaagaacgccaacaagcg
cgcatcatggaaaagctgctcggtgagatcgaagagaccggtacttcgcaatttgaagaa
ctggcatccgaactgctcgcacagcacaactccgtagcggtgctggcagcagcgctcaag
atcatcggcgatgacctcgtcggcgatcaagagctgtcctccatcgacatgagcttgtcc
gaagtcgtcgacttctccaagcgcttccgtgaacagcgcggcaccaccggcggaggcggc
ggctacggcaaccgcggcggaggcggcggttacggcaatcgtggcggaggcggcggctac
cgtggcggcggtgatcgtcgcagcggcggcggcggttacaaaaaaggcccgggcggcggc
ggtggcggttacagcaaagaccgtcgtgcttccggcggtggtaccggtaccggtaccggc
ggcagcagctacggcaaccgtgaaggcggcggctacggtgaaaagcgtggcggcggttac
ggcgagaagcgcagcggcggctacggcaaccgtgaaggcggcggctacggcaaccgtgaa
ggcggcggttacggcaaccgtgaaggcaaccgcgaaggcagccgtgacggtggcggcgga
cgtcgtcgcacccacttctaa
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integrated database retrieval system
