Tumebacillus avium: CBW65_17215
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Entry
CBW65_17215 CDS
T04874
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tum
Tumebacillus avium
Brite
KEGG Orthology (KO) [BR:
tum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tum03016
]
CBW65_17215
Enzymes [BR:
tum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CBW65_17215
Transfer RNA biogenesis [BR:
tum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CBW65_17215
Prokaryotic type
CBW65_17215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ARU62507
UniProt:
A0A1Y0IQ01
LinkDB
All DBs
Position
3522902..3523816
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AA seq
304 aa
AA seq
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MNGILVINKPAGMTSHQVVGKARRILSIKKIGHTGTLDPDVQGVLPICIGMATRVAEYLL
DQSKAYRGEVTFGFSTTTQDASGEPVETADDVSLTEAAVREAFASFVGTILQRPPAFSAI
KIDGKRAYDLARKGEEVEIPPREVTIYKLEIEEMQLDLPRPKVRFYVECSKGTYVRTLCH
DLGQQLGVPAHMSELLRTKSGPFDLSQALTFETLEELVKNGTIGEVLLPMQAALPHLPQN
VIPEVLERRVNNGRELTIKRQIPGAEVGSLVRIESRTGKLLALYRVTEVADGELHTLPEK
VFKE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaatcctcgtcatcaacaaaccggcgggcatgacgtcgcatcaggttgtgggc
aaggcgcggcggatcttgagcatcaaaaagatcggtcacaccggcaccctcgacccggac
gtgcaaggcgtcctgccgatctgcatcggcatggcgacccgcgtcgccgagtaccttctc
gaccagtccaaagcatatcgtggtgaggtgacgtttggattctcgaccacgacgcaggat
gcttccggcgaaccggtcgagacggcggacgatgtcagcctcaccgaagcggccgttcgc
gaggcgttcgcttcgtttgtcggtacgatcctccagcgtccgcccgcattttcggcgatc
aagatcgacgggaagcgggcgtatgacctggcccgcaaaggggaagaagtggagatcccg
ccacgcgaagtgacgatttataagctggagatcgaagagatgcagttggacctgccaagg
cccaaagtgcgtttttatgtggaatgttccaaaggcacatatgtgcggacgctctgccac
gatcttggacagcaattgggcgttccggcgcacatgtcggagctgttgcgcaccaagtcg
ggtccgtttgacctgtcgcaggcgctcaccttcgaaacgctggaagagcttgtgaaaaat
ggcacgatcggggaagtgcttttgccgatgcaggcggcgcttccgcatctgccgcaaaac
gtaatcccggaagtgctggagcgtcgcgtcaataacgggagagagttgaccatcaaacgc
cagattccgggagctgaggtcgggtcgcttgtgcggatcgagagccgtaccgggaaactg
ctggcgctgtatcgcgtcacagaggtcgcggacggagaactgcacacgctgccggaaaag
gtgtttaaagagtag
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