KEGG   Tumebacillus avium: CBW65_23870
Entry
CBW65_23870       CDS       T04874                                 
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
tum  Tumebacillus avium
Pathway
tum03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CBW65_23870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tum03400]
    CBW65_23870
Enzymes [BR:tum01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CBW65_23870
DNA repair and recombination proteins [BR:tum03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CBW65_23870
    RecFOR pathway proteins
     CBW65_23870
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_16 Mg_chelatase DUF815 AAA_22 nSTAND3 TsaE Rad17 AAA_18 AAA_14 Sigma54_activ_2 NB-ARC NTPase_1 RNA_helicase AAA_3 AAA_28 Bac_DnaA AAA_17 Resolvase AAA_24 NPHP3_N AAA_33 ABC_tran RsgA_GTPase AAA_13 IstB_IS21
Other DBs
NCBI-ProteinID: ARU63721
UniProt: A0A1Y0IT68
LinkDB
Position
complement(5235022..5236017)
AA seq 331 aa
MEDRFVTSQPLQEDSDQETLRPRYLHEMIGQRKVRENMKVYIEAAKMRREALDHVLLYGP
PGLGKTTLSNIIANELGVNVRVTSGPAIERPGDLAALLTNLQEGDVLFIDEIHRLNKSVE
EVLYPAMEDFALDIIIGKGPAARSVRLDLPPFTLVGATTRAGMLSLPLRDRFGVVCHLEY
YDNEDLQKIIVRTAEILGVPIVPDGAREMATRSRGTPRIANRLLKRVRDFAMVQGDGVIT
AELADHALKLIQVDQKGLDEVDHKLLLTIIEKFGGGPVGLDTISATIGEEPDTIEDVYEP
YLLQIGFIQRTPRGRIVTPHGYHHFGLTPPE
NT seq 996 nt   +upstreamnt  +downstreamnt
gtggaagatcggttcgttacatctcaacccttgcaggaagacagcgatcaagagacgctg
cgcccccgctatctgcacgaaatgatcgggcagcgcaaggtgcgcgaaaacatgaaagta
tatatcgaagcggcgaagatgcgccgggaagcgctcgatcatgtcctgctgtacggtccc
cccggccttggcaagacgacgctttccaatatcatcgccaatgagcttggcgtaaatgtg
cgcgtcacgtccggcccggcgatcgaacgcccgggtgatctggcggcgcttttgaccaat
ttgcaagaaggcgatgttttgtttatcgacgagattcatcgcctgaacaaaagcgtggaa
gaagtgctgtatccggcgatggaggattttgcgctcgacatcatcatcggcaaagggccg
gctgcgcgttctgtgcggctcgacctgccgccgtttaccctcgtcggcgcgacgacgcgg
gccgggatgctgtccctgccgctgcgcgaccggtttggcgtggtctgccatctggagtat
tacgacaatgaagatctgcagaagatcatcgtccgcaccgctgagatcctcggcgtgccg
atcgttcctgacggcgcccgggagatggccacacggtcgcggggcacaccgcgtatcgcc
aaccggctgctcaagcgggtgcgcgacttcgcgatggtgcagggcgacggtgtgatcacg
gccgagcttgccgaccacgcgctgaagctgatccaagtcgaccaaaagggtctggatgaa
gttgaccacaaactgctcttgacgatcatcgagaaattcggcggcggcccggtcgggctg
gacacgatctctgcgacgatcggcgaagaaccggatacgattgaagacgtttacgagccc
tatctgcttcagatcgggtttatccaacgtacaccgagagggagaattgtcacgccgcac
gggtatcaccactttggtttgaccccgccggagtga

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