Thiothrix unzii: J9260_01305
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Entry
J9260_01305 CDS
T07174
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tun
Thiothrix unzii
Pathway
tun03420
Nucleotide excision repair
tun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J9260_01305 (uvrD)
03430 Mismatch repair
J9260_01305 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tun03400
]
J9260_01305 (uvrD)
Enzymes [BR:
tun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J9260_01305 (uvrD)
DNA repair and recombination proteins [BR:
tun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J9260_01305 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
J9260_01305 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AtzG-like
Motif
Other DBs
NCBI-ProteinID:
QTR53757
UniProt:
A0A975F9I4
LinkDB
All DBs
Position
219558..221777
Genome browser
AA seq
739 aa
AA seq
DB search
MNNTQSPILAPLNPQQQLAVAAPPKSVLVLAGAGSGKTRVLVHRIAWLIEVENVSPLSIL
AVTFTNKAAAEMRGRIQDLLQLPSGGMWVGTFHGISHRLLRLHWQQAKLPQTFQILDSED
QIRMVKRILKSLELDETRFPPRQVAGFINARKDEGSRPHHIEDKGDFNQRQMVQIYSVYE
QTCQRNGVVDFAELLLRSLELLRDNPDLQQHYRNRFRHILVDEFQDTNALQYAWLRLLAG
DKNPVFAVGDDDQSIYGWRGAKIENIRNFTKHFPDCETVRLEQNYRSTANILNAANTLIS
NNKGRLGKNLWTDGKDGERLHLYAAFNEIDEARFVAGRIQKWVDQGGMRRDVAILYRSNA
QSRVFESTFNENRIPYRVYGGLRFFDRAEIKDALAYLRLTVNHQDDASFERIVNHPPRGI
GERTVDILRSHARATNLSLWEAAAQAADIGDFTPRASNGVLGFVQLIKRMASDIHSLPLR
EQVEIVIELAGLKPHFLAKEKGEAGQGRVDNLNELVTAAQGYTYVQSEETPDMSELSAFL
SHAALEAGEGQGEAGEDCVQMMTLHSAKGLEFPLVFLCGLEEGLFPHQMSADDPARLEEE
RRLCYVGITRAEKELVMSYAEQRMLHGRTQFNPPSRFLRELPPELVEEVRPKVKAYQPTR
YTDGGGYRPVTPPAPVRTPNKYAESEVGYRIGQRVRHAKFGDGVIVDSEGSGAHSRVQVN
FKTAGVKWLVLGYANLEKL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacccaatcccctatactcgcccccctaaacccgcagcagcaactcgccgtt
gccgcgccgcccaaatccgtcctcgtcctcgcaggcgcaggcagcggcaaaacccgcgtg
ctggtacatcgcattgcatggctaatcgaagtcgaaaatgtctcgccattaagtatcctc
gccgtgaccttcaccaacaaagcggcggcagaaatgcgcgggcgcatccaagacctgctg
caactgcccagcggcggcatgtgggttggcacattccacggcatttcgcaccgtttgctc
cgcctgcactggcagcaagccaaattgccgcaaactttccaaatcctcgattccgaagac
cagattcggatggtcaagcgcatcctcaagtcattggaactcgacgaaacccgcttcccg
ccgcgtcaggtcgccggttttatcaatgcgcgtaaggacgaaggttcgcgcccgcaccac
attgaagacaaaggcgatttcaaccaacgccaaatggtgcaaatttacagcgtgtacgaa
caaacctgccaacgcaatggcgtggtcgatttcgccgaactgttgctgcgctcgctggaa
ttgctgcgcgataaccccgacctgcaacagcattaccgtaaccgtttccgccacattttg
gtggacgaattccaagacaccaacgcgctgcaatacgcatggttgcgcctgctggcgggg
gataagaatccggtatttgcggtgggcgatgatgaccagtcgatttacggctggcgcggc
gcaaagatcgaaaacatccgcaatttcaccaaacatttccccgattgcgaaacggtgcgg
ctggaacaaaattaccgttctactgcgaatatcctcaacgccgccaacaccttgatcagc
aacaacaaagggcgcttgggcaaaaacttgtggacggatggcaaagacggcgaacgcctg
cacctctacgccgccttcaatgaaatcgacgaagcccgctttgttgccggacgcattcaa
aaatgggtggatcagggtggaatgcgtcgcgacgttgccattttgtaccgttccaacgcc
caatcgcgggtatttgaaagcactttcaatgaaaaccgtattccgtaccgcgtctacggc
ggcttacgcttctttgatcgcgccgaaatcaaggacgcgctggcgtatttgcgcctcacc
gttaaccatcaagacgatgcctcgtttgaacgcatcgtcaatcacccaccgcgcggtatt
ggcgaacgcaccgtcgacatcctgcgcagccacgcccgcgccaccaatctgtccttatgg
gaagccgccgcgcaagccgctgacatcggcgatttcaccccgcgtgccagcaatggcgta
ctcggtttcgtgcaactgatcaaacgcatggcgagcgacattcacagcctgcccttgcgc
gaacaagtcgaaatcgtcatcgagcttgccggactcaagccgcattttctcgccaaagaa
aaaggcgaagcggggcaagggcgcgtcgacaacctcaacgaattagtcaccgccgcacag
ggttacacctacgtgcaatccgaagaaaccccggatatgagcgaactttccgccttcctc
tcgcacgccgcgttggaagcgggcgaaggtcagggcgaagccggtgaagattgcgtgcaa
atgatgacgctgcactctgccaagggtttggaattcccgctggtgtttttgtgcggtttg
gaagaaggcttgttcccgcaccaaatgtccgccgatgacccggcacggttggaagaagaa
cgccgcctgtgctacgttggcattacccgtgcggaaaaagaactggtgatgagttacgcc
gaacagcgcatgttgcacgggcgtacccaattcaacccgccgtcacgtttcttgcgcgaa
ttaccgccggaattggtggaagaagtgcgcccgaaagtgaaagcgtatcagcccacccgt
tacaccgatggcggcggctaccgtccggttacgccgcccgcaccagtacgcaccccaaac
aaatacgccgaaagcgaagtcggctatcggatcgggcaacgggtgcgccatgccaaattt
ggcgatggagtgatcgtggattctgaaggttcgggagcgcactcgcgggtgcaggtaaat
ttcaaaactgccggggtgaagtggctggtgttggggtatgcgaatttagaaaaactgtaa
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