KEGG   Thiothrix unzii: J9260_01670
Entry
J9260_01670       CDS       T07174                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
tun  Thiothrix unzii
Pathway
tun02024  Quorum sensing
tun03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tun00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    J9260_01670 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    J9260_01670 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tun03019]
    J9260_01670 (hfq)
   03036 Chromosome and associated proteins [BR:tun03036]
    J9260_01670 (hfq)
Messenger RNA biogenesis [BR:tun03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     J9260_01670 (hfq)
Chromosome and associated proteins [BR:tun03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    J9260_01670 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QTR53826
UniProt: A0A975IH54
LinkDB
Position
complement(282586..282816)
AA seq 76 aa
MSKGHTLQEPFLNALRKERIPVSIYLVNGIKLQGHVESFDQFVVLLGNTVSQLVYKHAIS
TIVPARPIKLALAPEE
NT seq 231 nt   +upstreamnt  +downstreamnt
atgtcgaaagggcacacattacaagaacccttccttaatgctctgagaaaggaacggatt
ccagtctccatttaccttgttaacggcatcaagctgcaaggccatgtagagtcatttgac
caattcgttgtcctgctgggtaacactgtcagccagttggtttataaacatgctatttcc
acgatcgtgcctgcgcgtccgattaagttggctttagctccagaagaataa

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