Thiothrix unzii: J9260_04350
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Entry
J9260_04350 CDS
T07174
Name
(GenBank) DEAD/DEAH box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
tun
Thiothrix unzii
Pathway
tun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J9260_04350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tun03019
]
J9260_04350
Enzymes [BR:
tun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J9260_04350
Messenger RNA biogenesis [BR:
tun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J9260_04350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QTR54332
UniProt:
A0A975FAL9
LinkDB
All DBs
Position
832325..833611
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AA seq
428 aa
AA seq
DB search
MENFYLSQTRFDSFPLDERLLASLRDAGFEYCSRIQADSLPLTLAGQDVAGQAQTGTGKT
GAFLVAVFQHLLNNPQPNAEAGTVRCMILAPTRELAIQIARDAESLGQHIGLRTVLVYGG
AGYDKQRRQFEEPVDVLIGTPGRVIDYWKQHVFTLKHVQALVMDEADRMFDMGFIQDVRY
LMRKLPPPDKRLNMLFSATLSHRVLELAYEHMNNPQKVQIEAESVRADNIVEHVYFPANE
EKIPLLIGLIRQLTPFRAIVFVNTKHIAEKIDDYLRGNGISSDLISGDVRQNKRERLLKD
FEAGQFQVLIATDVAARGLHIPDVSHVFNFDLPQMAEDYVHRIGRTARAGASGEAHSFAC
EDTAFYLPEIEEYTGKSIPVTKITNALLATDLVRPHRQQRERAGQHGGDSRPPRRNNNAP
RGNRSSGR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttctacttaagtcaaacacgtttcgattcattccctttggatgaacgttta
ttagcgtccttgcgtgatgctggttttgagtattgctcgcggattcaggccgattcattg
ccgttgacattggcggggcaagacgtagcagggcaagcacaaacgggcacgggtaaaacc
ggcgcgtttttggtggcggtgtttcagcatttgctgaacaatccgcagccgaatgcggaa
gctggcacggtgcgttgcatgattttggctcctacccgcgagttggcgattcagattgcg
cgtgatgcggaaagtctggggcagcacattgggttgcgcactgtattggtttacggtggt
gcgggttacgacaagcagcggcggcaatttgaagagccggtggacgtattgattgggaca
cctgggcgcgtcattgattactggaaacagcacgttttcaccctcaagcatgtgcaagct
ttggtcatggatgaagcggatcgcatgtttgacatgggctttattcaggacgtgcgctac
ttaatgcgcaaactgccaccgccggataaacgcttaaatatgctgttttccgcgacactc
tcgcaccgggtgttggagctggcgtatgaacacatgaacaacccgcaaaaagtacaaatc
gaagcggaatcggtgcgtgctgataacattgtggaacacgtgtatttccccgccaatgaa
gaaaagattccgttattgattgggttgattcggcaattgaccccgtttcgggcgattgtg
tttgtgaataccaaacacattgcggaaaagattgatgattacttgcgtggcaacggcatt
agctcggatttgatttccggtgatgtgcgtcagaataaacgtgagcggctgcttaaagat
tttgaagcagggcagtttcaggtgttgattgctaccgacgtggcggcacgcgggttgcat
attcctgatgtgagccatgtgtttaacttcgatttaccgcaaatggcggaagattacgtg
catcggattgggcgtactgcgcgtgccggggcttcgggtgaagcgcatagctttgcgtgt
gaagataccgcgttttacttgccggagattgaagaatacaccggcaaatcgattcccgtg
accaaaatcaccaacgcattattggcaaccgatctggtgcgcccgcaccggcagcaacgt
gaacgtgccggacaacacggtggtgatagccgtccgccgcgccgcaacaataatgccccg
cgcggcaatcgctcttcaggccggtaa
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