Thiothrix unzii: J9260_11835
Help
Entry
J9260_11835 CDS
T07174
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tun
Thiothrix unzii
Pathway
tun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J9260_11835 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tun03400
]
J9260_11835 (recD)
Enzymes [BR:
tun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
J9260_11835 (recD)
DNA repair and recombination proteins [BR:
tun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J9260_11835 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
NAT10_TcmA_helicase
SH3_13
SLFN-g3_helicase
AAA_22
CbiA
AAA_16
AAA_33
nSTAND3
AAA_28
PIF1
DEAD
CATASP
AAA
MeaB
UvrD_C
NTPase_1
ResIII
DUF6866_C
TrwB_AAD_bind
RNA_helicase
nSTAND_NTPase5
Zeta_toxin
SRP54
Motif
Other DBs
NCBI-ProteinID:
QTR52417
UniProt:
A0A975IG60
LinkDB
All DBs
Position
complement(2371664..2373235)
Genome browser
AA seq
523 aa
AA seq
DB search
MTPALTHPLDEQLAALLQRLGGTADVAGLRALVKYVSERTRNGVIAAPLAGLPGVDPAAL
QADVVGEPGDYKPIIVNATHAWLYRYWQYEERLATQVRQRLTQGEGVAGIPALWIISGGP
GTGKTTTVTRLMADLLAQGVRSERILLAAPTGKAAMRMLESIRDTRERLQLPVEIAEQLP
TQARTLHRLLGYIPNRVGFRHHAQHPLPADVVIVDEASMIDISLMTHLFEAVSPSARLIL
LGDKDQLASVETGSIFRDLCEAPALQAHRQVLQRSYRFSESDGVGQLAQAIRAADETRLL
VVLAAEEFPSVSWDESGEGLQAQWLQDGWQAYVSAVQAGDVTAVFQAFNDLRILTPLRQG
RLGVEGLNPWVDNVMQRLLPTHAGALRPWYVGRPVMVTQNDYRQELFNGDIGIALPDAQG
VLRVWFPTEQAGEFRAVAPIRLPAHETAWAMTIHKSQGSEFTRVLLLLPDVEDSPLLGRE
LLYTAVTRAKQGIHVIASRATLQRALQQVMPPASCLQEKLTVV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ttgactcccgcactgacccatccgctagatgagcaacttgccgccttgctgcaacggctg
ggcggtacggcggatgttgctggcttgcgtgcgctggtgaaatacgtcagtgagcgcacc
cgtaacggggtgattgccgcaccgttggcggggttgcccggtgttgatcccgccgcgctg
caagcggatgtggtgggtgaaccgggtgattacaaaccgattattgtgaacgcgactcat
gcgtggctttaccgttactggcaatacgaagagcgtttggcgacgcaggtgcgtcaacgt
ttgacacaaggggaaggtgtagcaggcattcccgcgctgtggattatttccggcggcccc
ggtacgggtaaaaccaccacggtaacgcgcctgatggcggatttactggcgcaaggggtg
cgctcggaacgcattttgctggcagcacccacgggtaaagcggcgatgcgaatgctggag
tcgattcgcgatactcgcgaacgtttacaattgccggtggaaattgccgaacagttgccg
acgcaagcgcgtactttgcaccgtttactgggctacattcccaaccgcgtggggtttcgt
caccatgcgcaacacccattgccagcggatgtagtcatcgtggatgaagcctcgatgatt
gatatttccctaatgacgcatttatttgaggcggtgtcgccctcggcacggctgatttta
ttgggcgataaagatcaattggcttcggtggaaaccgggtcgattttccgcgatttgtgc
gaagctccggcgttgcaagcgcatcgtcaggtattgcagcgtagttaccgtttcagcgag
agcgatggggtcgggcagttagcgcaggcgattcgtgccgctgatgaaactcgtttgctg
gtcgtgttagccgcagaggaatttcctagcgtttcgtgggatgaaagcggcgaaggtttg
caagcgcagtggttacaagatggctggcaagcgtatgtttcagcagtgcaagcgggtgat
gtgacagcggtgtttcaggcatttaacgatttgcgcattttaaccccgttgcgccaaggt
cgtttgggtgtggaaggcttgaatccgtgggtggataacgtgatgcaacgtttgttaccc
acgcacgcgggggcgttgcgcccttggtatgtgggcaggccggtgatggtgacgcaaaac
gattaccgtcaggaattgtttaacggcgatattgggattgcgctaccggatgcgcaaggc
gtgttgcgggtgtggtttccgaccgagcaggcgggggagtttcgtgcagtcgcgccgatt
cgtttgcctgcccacgaaactgcttgggcgatgacgattcataaaagtcaggggtcggaa
tttacccgcgtgctattactgttgccggatgtggaggattcaccgttgctggggcgcgaa
ttgctgtacaccgctgtgacccgtgcgaaacaggggattcacgtgattgcgagtcgcgct
acgttgcaacgcgcattgcagcaagtgatgccgcctgcctcgtgtttgcaggagaaatta
acggttgtttag
DBGET
integrated database retrieval system
