Thiothrix unzii: J9260_16380
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Entry
J9260_16380 CDS
T07174
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tun
Thiothrix unzii
Brite
KEGG Orthology (KO) [BR:
tun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tun03032
]
J9260_16380
03400 DNA repair and recombination proteins [BR:
tun03400
]
J9260_16380
Enzymes [BR:
tun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
J9260_16380
DNA replication proteins [BR:
tun03032
]
Prokaryotic type
DNA Topoisomerases
J9260_16380
DNA repair and recombination proteins [BR:
tun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J9260_16380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QTR53258
UniProt:
A0A975F934
LinkDB
All DBs
Position
3276785..3279235
Genome browser
AA seq
816 aa
AA seq
DB search
MSENLVIVESPAKGKTIQKYLGPGFEVLASYGHVRDLIPKEGAVDPENGYAMRYEIIDRN
QKHVDAIARALKKADTLYLATDPDREGEAISWHLHELLQERGALKNKTVHRVVFHEITKR
AVQEAIGNPRELAYDLVDAQQARRALDYLVGFNLSPLLWRKIKQGLSAGRVQSPALRLIV
EREEEIERFVTQEYWTMTAHNEKDAQAFSARLHTLDANKLDQFDINNEAQATALRERLLQ
AAQGSLLVTKVEKKQRKRYPSPPFTTSTLQQEAVRKLRFSTQRAMRIAQQLYEGIDLGSG
GTVGLITYMRTDSVSLANEAVTELRELIGQRYGSSKLPETPNFYKTKSKNAQEAHEAVRP
TSALRTPESVKAFLSEEQFKLYDLIWKRTVACQMIFATFDTVAADLTATAGSFFRATGST
VRDPGFLSVYEEGLDDRENEKDNALPPLVEGERITLLDINADQHFTEPPPRYSEASLVKA
LEEFGIGRPSTYSSIISTLLSREYVELEMRRFTPTDIGRIVNRFLTEHFPQYVDYAFTAN
LEDQLDEISRGEKTWVPVMDAFWQPFHQLVDEKMGSVNRSDVLQSRELGVDPASGKPMSV
RMGRFGPFVQIGSKDDEEKPVFASLRPGMKMDSITFEQALELFKLPRHLGENAEGKAIST
NVGRFGPYVKYGSEYASLGKQDDPYTLTLERALELIAEKKQKDAEKLLRDFGDGLQVIKG
RWGPFLKQGKINAKLPKDRDIDSLTLEECQALIAAATPAKPAKKTAAKKASADDTTPVAE
AKPAAKKTPVKKAVAKTATTKKAAPKKPASKSSKTP
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaatctggtcatcgtcgaatctccggcgaagggaaaaacaatccaaaagtat
ttggggccgggctttgaagtccttgcctcttatggtcatgtgcgtgacctaataccgaag
gaaggcgcggtagaccctgagaatgggtatgctatgcgctatgaaattatcgaccgcaac
cagaagcatgtcgatgcaattgcgcgggcattaaaaaaagctgataccttatatttggcg
actgacccggacagggaaggtgaagccatttcttggcatttgcatgaattgttgcaagaa
cgtggtgcgttaaaaaataaaacggtgcatcgggtagtcttccacgaaattaccaaacgt
gcggttcaagaagcgataggcaatccgcgtgaactggcgtatgacttggtggatgcgcag
caagcgcggcgcgcgctggattacttggtgggctttaacttgtcgccgttgctgtggcgt
aagattaaacaaggcttgtcagcaggacgggtgcaaagcccggcattgcgcttgattgtg
gagcgtgaggaagaaattgaacgcttcgttacccaagaatactggacgatgactgcgcac
aatgaaaaagacgcgcaggcgtttagcgcacgtttacacaccttggatgccaacaagctt
gatcagtttgacattaataatgaagcacaagcgacagcgttgcgcgaacgtttattgcaa
gccgcgcaaggcagtttgttagtcaccaaggtcgagaaaaaacagcgcaagcgttaccct
tccccgccgtttacgacttccaccttgcagcaggaagcggtgcgtaaattgcgcttttca
acccaacgcgctatgcggattgcccagcaattgtacgaagggattgatttgggcagtggc
ggtacggtgggtttgattacctatatgcgtactgactcggtatcgttggcaaacgaagcc
gtaacggaattgcgcgagttaattgggcaacgttacggcagtagtaaattgccggaaacc
ccgaacttttacaaaaccaagtccaaaaacgcacaggaagcccacgaagcggtgcgcccg
acttccgccttgcgtaccccggaaagcgtgaaggcgtttttgagcgaggaacagtttaag
ctgtacgatttgatctggaagcgcactgtagcgtgccagatgattttcgcgacgttcgat
acggtagcagcggatttgaccgcgactgccgggagctttttccgtgccaccggttcgacg
gtgcgtgaccccggtttcttgagcgtttacgaagaaggtttggacgaccgcgaaaacgag
aaagacaatgcgttgccaccgttggttgaaggtgaacggattactttgcttgatattaac
gcggatcagcattttaccgaaccaccgccacgttattcggaagcatcgttggtaaaagcg
ttggaagagtttggtattggccgcccttccacctattccagcattatttccacgttgctg
tcgcgtgaatacgtggaactggaaatgcggcgttttaccccaaccgatattgggcgcatt
gttaaccgtttcctgacggagcatttcccgcaatacgtggattatgcgtttaccgcgaat
ctcgaagatcaattggatgagatttctcgcggcgaaaagacttgggttccggtgatggat
gcgttttggcagccgtttcatcaattagtcgatgaaaagatgggcagcgtaaaccgcagc
gacgtattgcaatcacgcgaattgggggttgaccctgcgtccggcaaaccgatgtcagta
cggatgggacgtttcgggccttttgtgcaaattggctccaaagacgatgaagaaaagcca
gtattcgccagcctgcgtccgggtatgaagatggatagcattacctttgaacaggcgttg
gagctgtttaaattgccacgccatttaggggaaaatgccgaaggcaaagcgattagcacc
aatgtcgggcgtttcgggccttacgtgaaatacggcagcgagtacgcttcattaggcaag
caggatgatccttacaccctaacgttggaacgggcgttggagttgattgctgagaaaaag
caaaaggatgcggaaaaattgctgcgtgatttcggtgatggtttgcaagtcattaaaggt
cgttgggggccattcctcaaacaaggtaagatcaatgcgaaactgcccaaggatcgtgac
attgatagccttacgttggaagagtgccaagccttgattgcggcggcgactccggcaaag
cctgccaagaaaaccgctgctaaaaaagccagtgcagatgacacaacgccagtagccgaa
gccaagccagcggcgaagaaaacgccggtgaaaaaagcagttgccaagacagcgaccacc
aaaaaggcagctcctaaaaaacccgcgagtaaatcctcgaagacaccatga
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