Thiothrix unzii: J9260_16545
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Entry
J9260_16545 CDS
T07174
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tun
Thiothrix unzii
Pathway
tun03030
DNA replication
tun03410
Base excision repair
tun03420
Nucleotide excision repair
tun03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J9260_16545 (polA)
03410 Base excision repair
J9260_16545 (polA)
03420 Nucleotide excision repair
J9260_16545 (polA)
03440 Homologous recombination
J9260_16545 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tun03032
]
J9260_16545 (polA)
03400 DNA repair and recombination proteins [BR:
tun03400
]
J9260_16545 (polA)
Enzymes [BR:
tun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J9260_16545 (polA)
DNA replication proteins [BR:
tun03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
J9260_16545 (polA)
DNA repair and recombination proteins [BR:
tun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
J9260_16545 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J9260_16545 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Sigma_reg_C
Motif
Other DBs
NCBI-ProteinID:
QTR53290
UniProt:
A0A975F8B8
LinkDB
All DBs
Position
3315527..3318280
Genome browser
AA seq
917 aa
AA seq
DB search
MKSTKPLVLVDGSSYLFRAFHALPPLTNTHGEPTGAMHGVLNMLDKLRKDYDPEHMAVIF
DAPGKTFRDDLYPQYKANRPPMPDDLRCQIEPLLAIIRAQGYPLLIIPDVEADDVIGTLA
AHYDGKVIISTGDKDMAQLVDERVHLINTMSGHYADPAGVVEKFGVAPERIRDYLALIGD
TVDNVPGVNKVGPKTAVKWLDEYGSLENIMARAAEFKGKIGENLREALAHLPLSFELVTI
KCDVELDLQPETLAFDPPDVETLRGLYERYGFRTRLAGLDVEKKIPPSPPFSKRGTEEDE
LQLPLTPPFEKGGAGGIYSSILTQPDLEAWLTRLQAAAEFAFDTETTSLDYMEAQIVGVS
FAITPGEAAYLPLAHDYLGAPPQLNREAVLAQFKPLLEDPAIRKIGQNLKYDRSVLLNHG
ITLRGIAHDTMLQSYVLDSTASRHDFDTLCAKHLNHTTISFADIAGKGKNQLTFNQVGLE
QATPYAAEDADYTLRLHQHFWAQLQALDGQRKLYESVEVPLVSVLSTIERNGVKVDAAML
AHHSKELETRMHSVMLEAYAAAGQEFNLASPKQLGEILYTKLGLTAPRKTPKGQPSTAED
VLEELADMGHELPKLILVHRGLAKLKSTYTDKLPQQINPRTGRVHTSYHQAVASTGRLSS
SDPNLQNIPIRNEEGRRIRQAFIAESGCQLLAADYSQIELRIMAHLSRDAGLLNAFAQGL
DVHRATAAEVFGTPLAEVTTEQRRAAKAINFGLIYGMSAFGLAKQLGVDRRDAQDYVNLY
FARYPGVKQYMDDTREQARAQGYVETLFGRRLFLPDIHSKNAATRQYAERTAINAPMQGT
AADIIKKAMLAVDAWLQNSGLRTKMIMQVHDELVFEVPENEMATVREHVVALMTNVAVLA
VPLLVESGVGNNWDEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgaccaaaccgctcgtcctcgtggacggttcatcctacctgttccgcgctttc
cacgcgctccccccgctgactaatacgcacggcgagcctaccggtgcgatgcacggcgtg
ttgaatatgctggataaattgcgcaaggattacgacccagagcacatggcggtgattttc
gacgcacccggcaaaaccttccgcgatgacctttacccgcaatacaaagccaaccgcccg
ccgatgccggacgatttgcgctgccaaattgaaccgttgctggcgattatccgggcgcaa
ggctacccgctgctgattattcctgacgtggaagccgatgacgtaatcggcaccttggcg
gcgcactacgacggcaaagtgattatttccaccggcgacaaagacatggcgcaattggtg
gatgagcgcgttcacctgattaacaccatgagcgggcattacgccgaccccgctggtgtg
gtggaaaaattcggggttgcgccggaacgcatccgcgattacctcgcgctgattggcgat
accgtggataacgtccccggtgtcaacaaagttggccccaaaacagcggtcaaatggctg
gacgaatacggttcgctggaaaacattatggcacgagccgccgagttcaaaggcaaaatc
ggcgaaaacctgcgcgaagccttggcacatttaccgctgtctttcgagctggtcacgatt
aaatgcgatgtggaactggatttgcagccggaaacgctggcgtttgatccgccggatgtg
gaaaccttgcggggattgtatgagcggtatgggtttcggacgcggttggcggggttggat
gtagagaagaaaatcccccctagcccccctttttcaaagaggggaacagaagaagatgaa
ctgcaattgcctcttactcccccctttgaaaaagggggggcgggggggatttattcttca
atcctcacccaacccgacctagaagcttggctaacccgcctacaagccgccgccgaattc
gccttcgacaccgaaaccaccagccttgactacatggaagcgcaaatcgtcggcgtgtct
tttgccatcacaccgggagaggctgcttacctgccattggcacatgattacctcggtgca
ccaccacaactcaatcgcgaagcagtgttggcgcaattcaagcctttgctggaagaccct
gctattcgcaagatcgggcaaaatctcaaatacgaccgcagcgtattgctgaatcacggg
attaccttgcgcggtattgcccacgacaccatgctgcaatcgtatgtgctggattcgacc
gccagccgccacgatttcgacacgctgtgtgccaagcacctcaaccataccactatcagc
tttgcggatattgccgggaagggcaaaaaccaactgacgtttaatcaggtcgggttggaa
caagcgacaccgtatgcggcggaagatgccgattacaccctacgcttgcatcagcatttt
tgggcgcaactgcaagccctcgacgggcagcgcaagctctacgaaagcgtggaagtaccg
ctggtgagtgtgctatccaccattgagcgcaatggggtgaaagtcgacgcggcgatgttg
gcgcatcacagtaaggaactggaaacgcggatgcattccgtgatgttggaggcttacgca
gcagcagggcaggaatttaaccttgcctcacccaagcaattgggggaaatcctttacacc
aaacttggtttgaccgcgccgcgcaaaacccccaaagggcagccgtctaccgctgaggac
gtgctggaagaactcgcggatatggggcatgaattgcctaagctgattttggtgcatcgt
gggttggcgaaactcaaatccacgtacaccgacaaattgccacagcaaattaacccacgt
accgggcgggtgcatacctcttaccatcaggcggtggcttcgaccgggcggttgtcatcg
tcagaccctaatttgcagaatatcccgatccgcaatgaggaagggcggcgcattcgccaa
gcgtttatcgcggaaagcggctgtcaattgctggcggcggactattcccagatcgaatta
cgcattatggcgcatttgtcccgtgatgccggtttgctgaatgcgtttgcgcaagggttg
gatgtgcatcgtgccacggctgctgaagttttcggtacaccgttggcggaagtgaccacg
gaacaacgtcgggcggcgaaggcgattaacttcgggctgatttacgggatgtcggcattt
ggtttggcaaaacagttgggggtggatcggcgtgatgcgcaagattacgtcaatctgtat
tttgcccgttaccccggcgtgaaacagtatatggatgacacccgcgaacaggctcgcgcc
caaggctatgtggaaacgctgttcgggcggcgtttattcctgccggatattcattcaaaa
aatgccgctacccgtcagtatgcggagcgcactgcgattaatgcgccgatgcaaggcacg
gcggcggatattattaaaaaggcgatgctggcggtggatgcttggctgcaaaacagcggc
ttgcgtaccaaaatgattatgcaagtgcacgatgaactggtgtttgaagtgcctgaaaac
gaaatggcaacggtgcgtgaacacgtggttgcgctgatgacgaatgtcgcagtgttagca
gtgccattgttggtggagagtggggtggggaataattgggatgaggcgcattaa
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