Tupaia chinensis (Chinese tree shrew): 102467826 Help Entry 102467826         CDS       T02978                                  Symbol VPS41 Name (RefSeq) VPS41, HOPS complex subunit   KO K20184   vacuolar protein sorting-associated protein 41 Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup04140   Autophagy - animal tup04148   Efferocytosis tup05132   Salmonella infection Brite KEGG Orthology (KO) [BR:tup00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     102467826 (VPS41)    04148 Efferocytosis     102467826 (VPS41)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     102467826 (VPS41)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tup04131]     102467826 (VPS41) Membrane trafficking [BR:tup04131]  Endosome - Lysosome transport   Tethering complex    Hops complex     102467826 (VPS41) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_Vps41 Beta-prop_Vps41 zf-RING_Vps41 Clathrin zf_RING_Vps8_fungal WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Vps39_1 Beta-prop_THOC3 Beta-prop_EML_2 Beta-prop_HPS5 WD40_WDHD1_1st TPR_PEP5_VPS11 Beta-prop_WDR3_2nd Beta-prop_RIG_2nd zf_RING_Vps8 Beta-prop_WDR3_1st Frtz zf-RING_5 RIG-I_C Beta-prop_ACSF4 Beta-prop_IFT140_2nd Motif Other DBs NCBI-GeneID:  102467826 NCBI-ProteinID:  XP_014441244 LinkDB All DBs Position Un AA seq 859 aa AA seqDB search MAEFVFVLMASREPGSLEESTDESEEEESEEEPKLKYERLSNGVTGILQKDAASCMTVHD KFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYS GEEFHETFDCPIKIIAVHPLFVRSSCKQFVTGGKKLLLFERSWMNRWKSSVLHEGEGNIR SVKWRGHLIAWANNMGVKIFDITSKQRITNVPRDDISLRPDMYPCSLCWKDTVTLIIGWG TSVKICSVKERHANEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVILSYVKEVSEKTE REYCARPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVV VAKERDQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVERGEYDIAA RKCQKILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEG FATLVREWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLR HKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQH VYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEE TVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGFLN NIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKM HRTQMKGILVDEENICESCLSPILPSDAAKPFSMVVFHCRHMFHKECLPVPSLNSPVQFC NICSAKNRGPGSAILEMKK NT seq 2580 nt NT seq  +upstreamnt  +downstreamnt atggccgaatttgtcttcgtgttaatggcttcaagagaacctgggtctctggaagaatct acagatgagtctgaggaagaagagagtgaagaggagcccaaactgaaatatgaaagactt tccaacggggtgactggaatcctgcagaaggatgcagctagctgcatgacagttcatgac aagtttttggccctgggcacacattatggcaaggtttatttacttgacgtccaagggaac atcactcagaagtttgatgtaagtcctgtgaagataaatcagatcagcctggatgaaagt ggagaacacatgggtgtgtgttcagaggacggcaaggtgcaggtatttggactgtactca ggagaagaatttcatgagacttttgactgtcccattaaaatcattgctgtgcatcccctt tttgtgagatccagttgtaagcagtttgtgaccggagggaagaagttgctgctgtttgaa cggtcgtggatgaacaggtggaagtcttccgtcctgcatgaaggggaagggaacattcgg agtgtgaagtggagaggccatctgattgcttgggccaacaacatgggcgtgaagattttt gatattacctcaaagcaaagaatcaccaacgtgccccgggacgatataagtcttcgcccg gatatgtatccctgcagcctctgctggaaggacactgtgaccctgatcatcggctggggg acttctgtcaagatttgctcagtgaaggaacggcacgccaacgaaatgagggatttgcca agccgatatgtcgaaatagtgtctcaatttgaaactgaattctacatcagcgggctcgcc cctctctgtgaccagctcgtcatactttcctacgtaaaggaggtttcggaaaaaacggaa agagaatactgtgccaggccccgactggacatcatccagccactttcggagacttgcgag gagatctcttctgatgctttgacagtgagaggctttcaagagaacgaatgtagagattac cacttagagtactcggaaggggagtcgctcttttacatcgtgagcccaagagatgtcgtc gtggccaaggagcgagaccaggatgatcacatcgactggctccttgagaagaaaaaatat gaagaagctctgatggcagctgaaattagccaaaagaacattaaaaggcataagattctg gatattggcttggcatacataaatcacctggtggaaagaggcgaatacgacatagcagca cgcaagtgtcagaaaattcttgggaaaaatgcagccctctgggaatatgaagtttataaa tttaaagaaattgggcagctgaaggctattagtccttacctgccaagaggagatccagtt ctgaaaccactcatctatgaaatgatcttacacgaatttttggaaagtgattatgaggga tttgccacgttggttcgagaatggccaggagatctgtataacaactcagtaatagttcaa gccgtccgggatcatctgaagaaagacagtcagaacaagacgttactgaagaccctggca gaattgtacacctatgacaaaaactatggcaatgccctggaaatatacctgactttaaga cataaagatgttttccagttgatccacaagcataatcttttcagttctatcaaggataaa attgttttgttaatggattttgattcagagaaagctgttgatatgcttttggacaatgaa gataaaatttcaattaaaaaggtggtggaagagttggaagacagaccagagctgcagcac gtgtatttgcataagcttttcaagagggaccatcacaaggggcagcgctaccatgagaaa cagatcagtctgtacgccgagtacgaccggcccaacctactgcccttcctccgggacagt acccattgcccgcttgaaaaggctctcgagatctgtcaacagagaaactttgtagaagag acagtttatcttctgagccgaatgggtaatagtcggagtgccctgaagatgatcatggag gagttacacgatgttgataaagcgatcgaattcgccaaggagcaagatgacggagaactc tgggaagatctgattctgtactccattgacaaaccaccatttattactggctttttaaat aacattggcactcatgttgacccaattctcctgattcaccggattaaggaaggaatggag atccccaatttgagagattccttggttaaaattttacaggactacaacctgcaaattctg cttcgtgaaggctgcaagaagattctagtggctgactctctgtcgttactgaagaaaatg caccggactcaaatgaaaggcatcctggtcgatgaggagaatatctgtgaatcgtgcctg tcccctattcttccatcagatgcagccaagcccttcagcatggtggtcttccattgccgg cacatgttccacaaggagtgcctgcccgtgcccagcttgaactcccctgtgcagttctgc aacatctgcagcgcaaagaaccgcggaccaggaagcgcaattttggagatgaaaaagtag

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