KEGG   Tupaia chinensis (Chinese tree shrew): 102468100
Entry
102468100         CDS       T02978                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
tup  Tupaia chinensis (Chinese tree shrew)
Pathway
tup03082  ATP-dependent chromatin remodeling
tup03083  Polycomb repressive complex
tup04110  Cell cycle
tup04213  Longevity regulating pathway - multiple species
tup04330  Notch signaling pathway
tup04350  TGF-beta signaling pathway
tup04613  Neutrophil extracellular trap formation
tup04919  Thyroid hormone signaling pathway
tup05016  Huntington disease
tup05031  Amphetamine addiction
tup05034  Alcoholism
tup05165  Human papillomavirus infection
tup05169  Epstein-Barr virus infection
tup05200  Pathways in cancer
tup05202  Transcriptional misregulation in cancer
tup05203  Viral carcinogenesis
tup05206  MicroRNAs in cancer
tup05220  Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:tup00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102468100 (HDAC1)
   03083 Polycomb repressive complex
    102468100 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    102468100 (HDAC1)
   04350 TGF-beta signaling pathway
    102468100 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    102468100 (HDAC1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    102468100 (HDAC1)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    102468100 (HDAC1)
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    102468100 (HDAC1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102468100 (HDAC1)
   05202 Transcriptional misregulation in cancer
    102468100 (HDAC1)
   05206 MicroRNAs in cancer
    102468100 (HDAC1)
   05203 Viral carcinogenesis
    102468100 (HDAC1)
  09162 Cancer: specific types
   05220 Chronic myeloid leukemia
    102468100 (HDAC1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    102468100 (HDAC1)
   05165 Human papillomavirus infection
    102468100 (HDAC1)
  09164 Neurodegenerative disease
   05016 Huntington disease
    102468100 (HDAC1)
  09165 Substance dependence
   05031 Amphetamine addiction
    102468100 (HDAC1)
   05034 Alcoholism
    102468100 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tup03036]
    102468100 (HDAC1)
Enzymes [BR:tup01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102468100 (HDAC1)
Chromosome and associated proteins [BR:tup03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     102468100 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     102468100 (HDAC1)
    BRAF-HDAC complex
     102468100 (HDAC1)
    REST complex
     102468100 (HDAC1)
    SHIP complex
     102468100 (HDAC1)
    MiDAC complex
     102468100 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     102468100 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102468100 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    102468100 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 102468100
NCBI-ProteinID: XP_006158173
LinkDB
Position
Un
AA seq 481 aa
MAQTQGTRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
AEEMTKYHSDDYIKFLRSIRPDNMSEHSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAS
AVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPVTSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGG
GGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAVPEESGEDEDDPDKRISICSSDKRIACEEEFS
DSDEEGEGGRKNSSNFKKAKRVKIEDEKEKEPEEKKEAPEEEKVKEEKPEAKGVEEEGKL
A
NT seq 1446 nt   +upstreamnt  +downstreamnt
atggcgcagactcagggcaccaggaggaaagtctgttactactacgacggggatgttgga
aattactattatggacaaggccacccaatgaagcctcaccgaatccgcatgactcacaat
ttgctgctcaactacggcctctaccgtaagatggaaatctaccgcccgcacaaggccagc
gcggaggagatgaccaagtaccacagcgacgactacatcaagttcctgcgctccatccgc
cccgacaacatgtccgagcacagcaagcagatgcagcgcttcaacgttggcgaggactgc
ccggtgttcgacgggctgttcgagttctgtcagttgtcgaccggcggctccgtggccagc
gccgtgaaactgaataagcagcagacggacattgctgtgaactgggccgggggcctgcac
catgcaaagaagtccgaggcgtctggcttctgttacgtcaacgacatcgtcttggccatc
ctggagctgctaaagtaccaccagagggtgctgtacatcgacatcgacatccaccacggc
gatggcgtggaggaggccttctataccacagaccgggtcatgaccgtgtcctttcataaa
tacggagagtacttcccaggaacgggagacctacgggatatcggggctggcaaaggcaag
tactatgccgttaactaccctctccgagacgggatcgacgacgagtcctatgaggccatc
ttcaagccggtcacatccaaagtgatggagatgttccagcccagcgccgtggtcttgcag
tgtggctcagactccttgtctggagatcgcttaggctgcttcaatctgaccatcaaaggg
catgctaagtgtgtggaatttgtcaagagcttcaacctgcctatgctgatgctgggaggc
ggtggctacaccatccgtaatgtcgcgcggtgctggacgtacgagacggccgtggccctg
gacacggagatcccgaatgagcttccttacaacgactacttcgagtacttcggaccagat
ttcaagcttcacatcagcccttccaacatgaccaaccagaacaccaacgagtacctggag
aagatcaaacagcggctgtttgagaacctgcggatgctgcctcacgcgccgggggtccag
atgcaggccatccccgaggacgccgtcccggaggagagcggcgaggacgaggatgacccc
gacaaacgcatctcaatctgctcctctgacaagcggattgcctgtgaggaagagttctct
gactccgacgaggagggggaaggtggccgcaagaactcttccaacttcaaaaaagccaag
agagtcaaaatagaggatgagaaagagaaagagccggaagagaagaaagaagccccagaa
gaggagaaagttaaggaggagaagcccgaagccaaaggggtcgaggaggagggcaagctg
gcctga

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