Tupaia chinensis (Chinese tree shrew): 102468660
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Entry
102468660 CDS
T02978
Symbol
LINGO1
Name
(RefSeq) leucine rich repeat and Ig domain containing 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tup04131
]
102468660 (LINGO1)
Membrane trafficking [BR:
tup04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
102468660 (LINGO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
102468660
NCBI-ProteinID:
XP_006142650
LinkDB
All DBs
Position
Un
AA seq
620 aa
AA seq
DB search
MQVSERMPAGAVRSMPSPLLACWQPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRK
RFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENVVSAVEPGAFNNLFN
LRTLGLRSNRLKLIPLGVFTGLSNLTRLDISENKIVILLDYMFQDLYNLKSLEVGDNDLV
YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR
LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS
AIEGSMLHQLLRLQELQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGN
LETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFT
CRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG
TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGE
ANSTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPR
KSDAGISSADAPRKFNMKMI
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgagcgagaggatgccggcgggggctgtgaggagcatgcccagccccctcctg
gcctgctggcagcccatcctcctgctggtgctgggctcggtgctgtcaggctcagccacg
ggctgcccaccgcgctgcgagtgctcggcccaggaccgcgccgtgctctgccaccgcaag
cgcttcgtggcggtgcccgagggcatccccaccgagacgcgcctgctggacctgggcaag
aaccgcatcaagacgctcaaccaggacgagttcgccagcttcccgcacctggaggagctg
gagctcaacgagaacgtggtgagcgccgtggagcctggcgccttcaacaacctcttcaac
ctgcggacgctgggtctgcgcagcaaccgcctgaagctcatccccctgggcgtcttcacc
ggcctcagcaacctcaccaggctggacatcagcgagaacaagatcgtcatcctgctggac
tacatgttccaggacctgtacaacctcaagtcgctggaggtcggcgacaacgacctcgtc
tacatctcccaccgcgccttcagcggcctcaacagcctggagcagctgacactggagaag
tgcaacctcacctccatccccaccgaggcgctgtcccacctgcacggcctcatcgtcctg
cggctgcgccacctcaacatcaacgccatccgggactactcgttcaagaggctgtaccgg
ctcaaggtcctggagatctcccactggccctacctggacaccatgacccccaactgcctc
tacggcctcaacctgacgtccctgtccatcacgcactgcaacctgacagccgtgccctac
ctggccgtgcgccacctggtctatctccgcttcctcaacctctcctacaaccccatcagc
gccatcgagggctccatgctgcaccagctgctgcggctgcaggagctgcagctggtgggc
gggcagctggccgtggtggagccttacgccttccgtggcctcaactacctgcgcgtgctc
aacgtctctggcaaccagctgaccaccctggaggagtcggccttccactcggtcggcaac
ctggagacgctcatcctggactccaacccgctggcctgcgactgccggctgctgtgggtg
ttccggcgccgctggaggctcaacttcaaccggcagcagcccacatgcgccacgcccgag
ttcgtgcagggcaaggagttcaaggatttccccgatgtgctgttgcccaactacttcacc
tgccgccgggcccgcatccgggaccgcaaggcccagcaggtgtttgtggatgagggccac
accgttcagttcgtgtgccgggcggacggcgacccgcctcccgccatcctctggctctcg
ccccgcaaacacctggtctcggccaagagcaacgggcggctcacggtcttccccgacggc
acgctggaagtgcggtacgcgcaggtgcaggacaacggcacgtacctgtgcatcgcggcc
aacgcgggcggcaacgactccatgcccgcccacctgcacgtgcgcagctactcgcccgac
tggccccaccagcccaacaagaccttcgccttcatctccaaccagccgggcgagggggag
gccaacagcacccgcgccaccgtgcctttccccttcgacatcaagaccctcatcatcgcc
accacgatgggcttcatctccttcctgggcgtcgtgctcttctgcctggtgctgctgttc
ctctggagccggggcaagggcaacaccaagcacaacatcgagatcgagtacgtgccccgc
aagtcggacgcgggtatcagctctgctgacgcgccccgcaagttcaacatgaagatgatc
tga
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