Tupaia chinensis (Chinese tree shrew): 102469054
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Entry
102469054 CDS
T02978
Symbol
SOX5
Name
(RefSeq) SRY-box 5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tup03000
]
102469054 (SOX5)
Transcription factors [BR:
tup03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102469054 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102469054
NCBI-ProteinID:
XP_006140366
LinkDB
All DBs
Position
Un
AA seq
778 aa
AA seq
DB search
MSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLL
TQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTALGTPE
RRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPE
SLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQ
QLLQQQHKINLLQQQIQVQFSSPSHSPVCTAQLPLFIDIFLRAQRVQGQLPPLMIPVFPP
DQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQ
LAAMQVSPGGKLPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSD
GKSPTSPTSPHMPALRINSGAGPLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEARQ
MKEQLRREQQVLDGKVAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDF
NMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSN
ISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEY
KAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPG
MPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSENHIAGQAN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcgaccagcctctccgtatggggaagcagatggagaggtagccatggtg
acaagcagacagaaagtggaagaagaggagagtgacgggctcccagcctttcaccttcct
ttgcatgtgagttttcccaacaagcctcactctgaggaatttcagccagtttctctgctg
acgcaagagacttgtggccataggactcccacttctcagcacaatacaatggaagttgat
ggcaataaagttatgtcttcatttgccccacacaactcatctacctcacctcagaaggca
gaagaaggtgggcgacagagtggcgagtccttgtctagtactgccctgggcactcctgaa
aggcgcaaaggcagcttggctgatgttgttgacaccttgaagcagaggaaaatggaggag
ctcatcaaaaatgagccagaagaaacccccagtattgaaaagctactctcaaaggactgg
aaagacaagcttcttgcaatgggatcagggaactttggcgaaataaaagggactcctgag
agcttagctgagaaggaaaggcaactcatgggtatgatcaatcagctgaccagtctgcga
gagcagctactcgctgcccatgatgagcagaagaaactggctgcatctcagattgagaaa
caacgccaacaaatggagctggccaaacagcagcaggagcagattgcaagacaacagcag
cagcttctgcagcaacaacacaaaatcaatttgcttcagcaacagatccaggtccaattt
tcctcaccttcccactccccagtgtgtacagcccagctgcctctgttcatcgatatattc
ctccgggcccagagggttcaaggtcagctgccgccattaatgattcccgtatttcctccc
gatcaacggactctggctgcagctgcccagcaaggattcctccttcctcccggcttcagc
tataaggctggatgcagtgacccttaccctgttcagctgatcccaactaccatggcagct
gctgctgcagcaacaccaggcttaggccctctccaactgcagcagttatatgctgcccag
ctagctgcaatgcaggtctctccaggaggcaagctcccaggcataccccaaggcaacctt
ggtgctgctgtatctcctaccagcattcacacagacaagagcacaaacagcccaccaccc
aaaagcaaggatgaagtggcacagccactgaacctatcagctaaacccaagacctctgat
ggcaaatcacccacatcacccacctctccccatatgccagctctgagaataaacagtggg
gcaggccccctcaaagcctctgtcccagcagcattagctagtccttcagccagagttagc
acaataggctatttaaatgaccacgatgctgtcaccaaggcaatccaagaagctcggcag
atgaaggagcaacttcggcgggaacagcaggtgcttgatggcaaggtggctgttgtgaat
agtctaggtctcaataactgccggacagaaaaggaaaaaacaacactggagagtctgact
cagcaactggcagttaaacagaatgaagaaggaaaatttagccatgcaatgatggatttt
aatatgagtggagattctgatggaagtgctggagtgtcagagtccagaatctatagggaa
tccagggggcgtggtagcaatgaaccccacataaagcgtccaatgaatgccttcatggtg
tgggctaaagatgaacggaggaaaatccttcaagcctttccggacatgcacaactccaac
atcagcaagatactgggatctcgctggaaagcgatgaccaacctagagaaacagccatat
tacgaggagcaggcccgtctcagcaagcagcacctggagaagtaccctgactacaagtac
aagcccaggccgaagcgcacctgccttgtagacggcaaaaagctgcgcattggggagtac
aaggcaatcatgcggaacaggcggcaggagatgcggcaatacttcaacgttgggcaacaa
gcacagatccccatcgccactgctggtgttgtgtaccctggagccatcgccatggccgga
atgccctcccctcacctgccctctgagcactcaagcgtgtctagcagcccagagcctggg
atgcccgttattcagagcacttacggcgtgaaaggagaggagccccatatcaaagaagag
atacaggctgaggacatcaatggagaaatttatgatgagtacgatgaggaagaagatgat
ccagatgtagattatgggagtgacagtgaaaaccatattgcaggacaagccaactga
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