Tupaia chinensis (Chinese tree shrew): 102470897 Help Entry 102470897         CDS       T02978                                  Symbol RB1CC1 Name (RefSeq) RB1 inducible coiled-coil 1   KO K17589   RB1-inducible coiled-coil protein 1 Organism tup  Tupaia chinensis (Chinese tree shrew) Pathway tup04140   Autophagy - animal tup04211   Longevity regulating pathway tup05010   Alzheimer disease tup05014   Amyotrophic lateral sclerosis tup05016   Huntington disease tup05017   Spinocerebellar ataxia tup05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:tup00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     102470897 (RB1CC1)  09150 Organismal Systems   09149 Aging    04211 Longevity regulating pathway     102470897 (RB1CC1)  09160 Human Diseases   09164 Neurodegenerative disease    05010 Alzheimer disease     102470897 (RB1CC1)    05014 Amyotrophic lateral sclerosis     102470897 (RB1CC1)    05016 Huntington disease     102470897 (RB1CC1)    05017 Spinocerebellar ataxia     102470897 (RB1CC1)    05022 Pathways of neurodegeneration - multiple diseases     102470897 (RB1CC1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:tup01009]     102470897 (RB1CC1)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tup04131]     102470897 (RB1CC1)    03029 Mitochondrial biogenesis [BR:tup03029]     102470897 (RB1CC1) Protein phosphatases and associated proteins [BR:tup01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      102470897 (RB1CC1) Membrane trafficking [BR:tup04131]  Autophagy   Autophagosome formation proteins    ULK complex     102470897 (RB1CC1) Mitochondrial biogenesis [BR:tup03029]  Mitochondrial quality control factors   Mitophagy factors    Parkin-independent mechanism factors     102470897 (RB1CC1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  ATG11 ATG17_like TBK1_ULD Motif Other DBs NCBI-GeneID:  102470897 NCBI-ProteinID:  XP_006140407 LinkDB All DBs Position Un AA seq 1593 aa AA seqDB search MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVC TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLERPDSLPEHEDSEKPEMKRSTEL VLSPDMPRTTNKSSLTSLHKSVEHVAPDSTDAESGNEIRECCPSTVHHDETSKDAKEGDL PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKA IKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKL FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSYCPSEVQPFLRVPL LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASVSQASPQSASSPRIESSTG ITTTTSPRTPPPLSVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDL DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTN ICGKEDFGDHATLNVQLERCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTA VEIRNIIEKVKCSLEITLKEKHQKELQSLKNEYEGKLDALVKEGEESENKIKKLKGDLLC LEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEIKELKESREIVLED LKKLHVENDEKIQLLRAELECLEQSHLKELEDTLHVKHTQEFEKVLTDHKVSLEKLKKEN QQRIDQIQASHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKVLLEEN RAQQKETLRSLLEQETETLRTEINKLNQKIQDNSENYQVGLAELRTLMTIEKDQCISELI SRHEEESNMLKTELNKITSLHHQAFEIEKTLKEQITELQSKLDSELSALEKQKDEKLAQQ EEKYEAIIQNLEKDKERLVMHQEQDREQLIQKLNYEKDEAVQTALQEFKLEREAVEKKLL EKVKQLENQIAKSPAVESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR TSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEE KKKLEEEVSKLRSSSFVPSPYVAAAPELYGACAPELPGETDRSAMETAEEGRVDSVMETS MMSVQENIPTLSEEKQRIMVLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDF QVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVME KEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV NT seq 4782 nt NT seq  +upstreamnt  +downstreamnt atgaagttgtatgtatttctggttaacactggaaccactctaacatttgacactgaactt acagtgcaaactgtggcagaccttaagcatgctattcaaagcaaatacaagattgctatt cagcaccaggtgctggtggtcaatggaggcgaatgcatggctgcagatagaagagtatgc acctacagtgctgggacggacacaaatccaatttttctttttaacaaagaaatgatctta tgtgatcgtccacctgctattcctaaaactacattttcaacagaaaatgacatggaaata aaagtcgaagagtctcttatgatgcctgcagtttttcacactgttgcttccaggacacaa cttgcagtggaaatgtatgaagttgccaagaagctctgttctttttgtgaaggccttgtc catgacgaacatctccagcatcaaggctgggctgcaatcatggccaatctggaggactgt tccaattcataccagaagctacttttcaaatttgaaagtatttattcaaattatctgcaa tccatagaagacatcaagttaaaacttactcacttaggaactgcagtttcggtaatggcc aagattccactgttggagtgcctaaccagacatagttacagggaatgtttggaaagaccg gattctttacctgaacatgaagactcagaaaaacccgagatgaaaagatccactgaactg gtgctctctcctgatatgcctagaacaactaacaaatcctcattaacctcacttcacaag tcagtggaacatgtagccccagacagcacagatgctgagagtggcaatgaaattagggaa tgttgtccaagtactgtccaccatgatgaaacttcaaaagatgctaaagagggtgatctg cctttttttaatgtttctttgttagactggataaatgttcaagatagacctaatgatgtg gaatctttggtcaggaagtgctttgattctatgagcagacttgatccacggattattcga ccatttatagcagaatgccgtcagactattgccaaacttgataatcagaatatgaaagcc attaaagggcttgaagatcgcctgtatgccctggaccagatgattgctagctgcagccgg cttgtgaatgagcagaaagagcttgctcagggatttttagctaatcaaatgagagctgaa aacttgaaggatgcatctgtattacctgatttgtgcctgagtcatgcaaatcagttgatg attatgttgcaaaatcatagaaaactgttggatattaaacagaagtgtaccactgccaaa caagaactagcaaataacctacatgtcagactgaagtggtgttgctttgtaatgcttcac gctgaccaagacggagagaaattgcaagcgttgctccgccttgtaatagagctgttagaa agagttaaaattgttgaagctcttagtacagttcctcagatgtactgcttagctgttgtt gaggttgtaagaagaaaaatgttcataaaacactacagggagtgggctggtgctttagtc aaagatggaaagcgattatatgaagctgagaagtctaaaagggaatcctttggaaaatta tttagaaagtcttttttgagaaatcgtctctttagaggactagactcctggccaccttcc ttttgtactcagaagcctcgaaagtttgactgtgaacttccagatatttcactaaaagat ttacagtttcttcaatcatattgtccttcagaagttcagccattcctcagggttccttta ctttgtgacttcgaacctctacaccagcatgtacttgctctccataatttggtaaaagca gcacaaagtttggatgaaatgtcccagaccattacagatctactgagtgaacaaaaggcg tctgtgagtcaggcttccccacagtctgcttcttcaccaaggatagaaagttcaacagga attacaactactacctcaccgagaactcctcctccactctctgttcaggatcccttatgt cctgcagtttgtccattagaagaattatctccagatagcattgatgcacatacatttgat tttgaaactatcccccatccaaacatagaacaaactattcaccaagtttctttagactta gattcattagcagaaagtcctgaatcagattttatgtctgctgtgaatgagtttgtaata gaagaaaacttgtcatctcctaatcctataagtgatccacaaagtccagaaatgatggtg gaatcactttattcatcggttatcaatgcaatagacagtagacgtatgcaggatacaaat atatgtgggaaagaggattttggagatcatgctactctgaatgtccagttggagagatgt agagttgttgcccaagactctcacttcagtatacaaactatcaaagaagacctttgccac ttcagaacatttgtacaaaaagaacagtgtgacttctcaaattctttaaaatgtacagca gtagaaataagaaatattattgagaaagtaaaatgttctctggaaataacactaaaagaa aaacatcaaaaagaattacagtctttaaaaaatgaatatgaaggtaaactcgatgcacta gtaaaagagggtgaagaaagtgaaaacaaaataaaaaaattgaaaggagatttactatgc cttgaagaggttttacagaataaagataatgaatttgctttggttaagcatgaaaaagaa gctgtcatatgcctgcaaaatgaaaaggatcagaaattgttagagatggaaaatataatg catactcaaaattgtgaaattaaagaactgaaggagtcacgagaaatagtgttagaagac ttaaaaaagctccatgttgaaaatgatgagaagatacagttattacgggcagagctcgag tgcttggagcaaagtcatctaaaagaattagaggacacattgcatgtcaagcacacacag gagtttgagaaagttctgacagaccacaaagtgtcgttggagaaattaaaaaaggaaaat cagcaaagaatcgaccagatacaagcgtctcatgccacagttatccaagaaaaagaacaa cagcttcaggaattaaaactcaaggtttctgatttgtcagacatgagatgtaagttagag gttgaacttgcattgaaagaagcagaaaccgatgaaataaaagttttgctggaagagaac agagcccaacagaaagagaccttgagatcactccttgaacaagagacagaaactttgaga acagaaataaataaactcaatcaaaaaattcaggataatagtgaaaattatcaggtgggc ttagcagagctaagaactttaatgacaattgaaaaagatcagtgcatttcagagttaatt agtagacatgaagaagaatctaatatgcttaaaactgaattaaacaaaataacatctttg catcaccaagcatttgaaatagaaaaaaccttaaaagaacaaataactgaactgcagagt aaattggattcagaattgagtgctcttgaaaaacaaaaagatgaaaaactcgcccaacaa gaggagaaatacgaagctattatccagaacctagagaaagacaaagagagattagtcatg caccaggaacaagacagagaacagttaattcagaagcttaattatgaaaaagatgaagct gttcagactgctctgcaagaatttaaattggagagagaagctgtcgagaaaaaattatta gaaaaagttaaacagcttgagaatcagatagcaaaaagtcctgccgttgaatctaccaga gaagattcttcaagcttagttgctgaacttcaggaaaagctgcaagaagaaaaagctaag tttttagaacaacttgaagagcaagaaaaacgaaagaatgaagaaatgcaaaatgttcga acatcattgatcgctgaacagcagaccaattttaacactgttttaacaagagagaaaatg agaaaagaaaacattataaatgatcttagtgacaagttgaaaagtacgatgcagcaacaa gaacgggataaagatttgatagaatcactttctgaagatcgagctcggttgcttgaagag aagaagaagcttgaagaagaggtcagcaagttgcgcagtagcagctttgttccttcaccg tatgtagctgcagcccctgagctttatggagcttgtgcccctgaactcccgggcgagacc gacagatcggccatggagacagccgaggaaggaagagtggattcggtgatggagacaagc atgatgtctgtacaggaaaatatccctacgctgtctgaagaaaaacaaaggataatggta ttagaacgaacattgcaattgaaagaagaagaaaataagcggttaaatcaaagacttatg tctcagagcatgtcttcggtatcttcaaggcattctgaaaagatagctattagagatttt caggtgggagatttggtgctcatcatcctggatgagcgccatgacaattacgtcttgttc actgtcagccctactttatatttcctgcattcggagtccctgcctgccctggacctcaaa ccaggtgagggggcttcaggtgcatctagaagaccctgggtacttgggaaagtaatggaa aaagaatactgtcaagctaaaaaggcacaaaatagatttaaagttcctttgggaacaaag ttttacagagtgaaagctgtgtcttggaataagaaagtataa

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