Tupaia chinensis (Chinese tree shrew): 102471153
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Entry
102471153 CDS
T02978
Symbol
DDX18
Name
(RefSeq) DEAD-box helicase 18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tup03041
]
102471153 (DDX18)
03009 Ribosome biogenesis [BR:
tup03009
]
102471153 (DDX18)
Enzymes [BR:
tup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102471153 (DDX18)
Spliceosome [BR:
tup03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102471153 (DDX18)
Ribosome biogenesis [BR:
tup03009
]
Eukaryotic type
90S particles
Helicases
102471153 (DDX18)
Pre-60S particles
102471153 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
TBPIP_N
Motif
Other DBs
NCBI-GeneID:
102471153
NCBI-ProteinID:
XP_006169605
LinkDB
All DBs
Position
Un
AA seq
669 aa
AA seq
DB search
MSHLPMKLLRKKIEKRNLKLRQRNLKLRGALDVSLSETQNGAVAEGTVEGGKVKKSLKRP
VKVALSESQNGDIPKEEVENVKVKTVPQKSTILVNGEAAMQSPNSESKKKKKKKKRKMVN
DAGPDTKKAKTENKEEFEEENKSPEETENSVEKPDEKDENEVPSLPLGLTGAFEDTSFAS
LSNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELI
VKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANG
INIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPIRRQTM
LFSATQTRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLLFTFLK
KNRKKKLMVFFSSCKSVKYHYELLNYIDLPVLAIHGRQKQNKRTTTFFQFCNADTGILLC
TDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRYL
KQSKVPLSEFDFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNV
NNLNLPQVALSFGFKVPPFVDLNVNSNADKRKKRGGGGGFGYQKTKKVEKSKIFKNISKK
SSDGRQFSH
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacctgccgatgaaactcctgcgcaagaagatcgagaagcggaacctcaaactg
cggcagcgaaacttaaagctacggggtgccttggatgtgagcctgtcagaaactcagaat
ggagctgttgctgaagggacagtggaaggtggaaaagttaagaaatccctgaaacggcct
gtgaaagtggccttgtcagaatcccagaatggagacatacctaaagaagaggtggaaaat
gtaaaagttaaaactgttccccagaaatccaccattttagtcaatggggaagcagcaatg
caatctcctaactcagaatcaaaaaagaaaaagaagaagaaaaagagaaaaatggtgaat
gatgctgggcctgataccaaaaaagccaaaactgaaaacaaagaagaatttgaagaagag
aataagtctcctgaagaaacagaaaacagtgtggagaagccagatgagaaagatgagaat
gaagtgcccagcctgccgctggggctaacaggagcttttgaggatacttcatttgcttct
ctctctaatcttgtcaatgaaaacactctgaaggcaattaaggaaatgggctttacaaac
atgactgaaattcaacataaaagtatcagaccacttctggaaggcagggatcttcttgca
gctgcaaaaacaggcagtggcaaaaccttggcatttctcatccctgcagttgaactcatt
gttaagttaaagttcatgcccaggaacggaacaggagtccttattctctcacctactaga
gagctggccatgcagacttttggtgttcttaaggagctaatgactcaccatgttcacaca
tacgggttgataatgggtggcagtaacagatctgctgaggcacagaaacttgctaatgga
atcaacatcattgtggccacaccaggccgtctcctggaccatatgcagaataccccaggg
tttatgtataaaaaccttcagtgtctggttattgatgaggctgatcggatcctggatgtt
ggctttgaagaggaattaaagcaaattattaaacttctgccaatacgcagacagaccatg
ctcttttctgctacacaaactcgcaaggtggaagatttggcaagaatttctctgaaaaag
gagccattgtatgttggtgttgatgatgataaagctaatgcaacagtggatggtcttgag
cagggttatgttgtttgcccctctgaaaagagattccttctgctctttacattccttaaa
aagaaccgaaagaagaagctaatggtcttcttttcatcctgtaaatcagtgaaataccac
tatgagttgctgaactacattgatttgcctgtcttggccatccatgggaggcagaagcaa
aacaagcgcacaaccacatttttccagttctgcaatgcagatacaggaatattgctgtgt
acagacgtggcagcaagagggcttgatattccagaagttgactggattgttcagtatgac
cctccagacgacccaaaggaatatattcatcgtgtgggtagaacagccagaggcctaaat
ggaagagggcatgccttgctcattttgcgcccagaagaattgggtttccttcgttacttg
aagcaatccaaggttccattaagtgaattcgacttttcctggtctaaaatttctgacatt
caatctcagcttgaaaaattgattgaaaagaactactttcttcataagtcagcccaggaa
gcatataagtcatacatacgagcttatgattcccattctctgaaacagatctttaatgtt
aataacttaaatttgccccaagttgctttatcctttggtttcaaagtgcctccttttgtt
gacctgaatgtgaacagcaatgcagacaagcgtaaaaagagaggaggcggaggtggattt
ggctaccagaaaaccaagaaagtcgagaagtccaaaatctttaaaaacattagcaagaaa
tcatctgatggaagacagttttctcactga
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