Tupaia chinensis (Chinese tree shrew): 102471538
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Entry
102471538 CDS
T02978
Symbol
NUP50
Name
(RefSeq) nucleoporin 50
KO
K14295
nuclear pore complex protein Nup50
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03013
Nucleocytoplasmic transport
tup05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102471538 (NUP50)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102471538 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102471538 (NUP50)
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102471538 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
102471538
NCBI-ProteinID:
XP_006164710
LinkDB
All DBs
Position
Un
AA seq
481 aa
AA seq
DB search
MRWSKTRIWVGKMAKRLADKELTDRNWDQEDEAEEVGTFSVASEEVLKNRAIKKAKRRNV
GFESDSGGAFKGFKGLVAPSGGGGFSGFGSGTGGKPLEGLSNGSSITRTPLFTSARAATE
PKTTFGSIATNGPNTLAEKKNSNPKTNGDSQQPSSSGLAVSKACAGNAYHKQLAALNCSV
RDWIVKHVNTNPLCDLTPIFKDYEKYLANIEQQHVNSGSSSSGSETNKMLVETQSPSLFG
STKLQQESAFLFHGNKTEDSSEKKMEVVSEKKADPSLGAASASFNFGKKIDSSVLGSLNS
GPLTGFSFSPGNSGLFGKDISQNKPVSSPFSTKTLESQAEDGNKECKGGDEEENDEPPKV
VVTEVKEEDAFYSKKCKLFYKKDNEFKEKGIGTLHLKPTANQKTQLVVRADTNLGNILLN
VLIAPNMPCTRTGKNNVLIVCVPNPPVDEKNATIPVTMLIRVKTSEDADELHKILLEKKD
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggagtaaaactcggatttgggttggaaaaatggccaaaagacttgctgacaag
gaattgacagataggaattgggatcaagaagatgaagctgaagaggtgggaacattctca
gtggccagcgaggaagtcttgaagaatagagccataaaaaaagcaaagcgtaggaatgtt
ggatttgaatctgatagtggaggagcttttaaaggatttaaaggcttggttgcaccttct
ggaggaggagggttttctggatttggtagtggcacaggagggaagcctctggaaggactt
tcaaatggaagcagcataaccagaacacctctcttcaccagtgcgagggcagccactgag
cccaagacaaccttcggttctattgccacaaatggccctaacaccttggccgagaaaaaa
aattcaaatcccaaaactaatggcgacagccagcagccctcctcctctggccttgctgtg
agtaaagcctgtgctgggaatgcctatcacaagcagctggccgccttgaactgctctgtc
cgagactggatagtgaagcacgtgaatacaaacccactctgtgacctgacgccgatcttt
aaagactatgagaagtacttagcgaatattgaacagcaacatgtgaacagtggcagtagc
agttctggaagtgagactaacaaaatgttggttgaaacacagtctccttccctatttggt
tcaacaaaattgcagcaagagtcagcatttttgtttcatggcaacaaaactgaagattct
tctgaaaagaagatggaggtggtatcggagaagaaagcggacccatcactaggagcagca
agtgcctcatttaattttggcaagaaaatcgatagctctgttttgggctcattaaactct
ggcccactgactggattttcattttcccctggaaactccggtttatttggcaaagatatt
tcccagaataaaccagtttcttcaccgttttccactaaaacattggagagccaagcagag
gatggcaataaggaatgcaaaggtggagatgaagaggagaatgatgagccacccaaagta
gtagttactgaagtaaaagaagaagatgctttttactccaaaaagtgtaaactattttac
aagaaagacaatgaatttaaagagaagggtataggtactctgcatttaaaacctacagca
aaccagaagacacagcttgtagtgcgggcagacaccaatttaggcaacatattgctgaac
gttctgattgcacccaacatgccgtgtacccggacagggaagaacaacgtcctcattgtc
tgtgtcccaaacccaccagtggatgagaagaacgccaccatcccagtcaccatgttaatt
cgggtaaaaaccagtgaggatgcagacgagctgcacaaaattttactggagaaaaaggat
gcctga
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