Tupaia chinensis (Chinese tree shrew): 102471714
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Entry
102471714 CDS
T02978
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Pathway
tup03018
RNA degradation
tup03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102471714
09123 Folding, sorting and degradation
03018 RNA degradation
102471714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tup03019
]
102471714
03041 Spliceosome [BR:
tup03041
]
102471714
Messenger RNA biogenesis [BR:
tup03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102471714
mRNA degradation factors
5'-3' decay
Lsm complex
102471714
Spliceosome [BR:
tup03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102471714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
KOW7_SPT5
Motif
Other DBs
NCBI-GeneID:
102471714
NCBI-ProteinID:
XP_006154623
LinkDB
All DBs
Position
Un
AA seq
91 aa
AA seq
DB search
MAANTTTNPLQLLPSELVDKGIGSRIHIVMKSDKEIVGTLLGFDGFVSMVLEDVTEFEIT
PEGRRITNLDQILLNGNNITMPVPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaacactactaccaacccgttgcagctgctgccgtcagagctggtggacaaa
ggtataggatcaagaattcacattgtgatgaaaagtgataaggaaattgttggtacactt
ctaggatttgatggttttgtcagtatggtactggaagatgttacagaatttgaaatcaca
ccagaaggaagaaggattactaacttagatcagattttgctaaatggaaataatataacc
atgccggttcctggaggagaaggacctgaagtatga
DBGET
integrated database retrieval system
