Tupaia chinensis (Chinese tree shrew): 102471915
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Entry
102471915 CDS
T02978
Symbol
PKD2
Name
(RefSeq) polycystin 2, transient receptor potential cation channel
KO
K04986
polycystin 2
Organism
tup
Tupaia chinensis (Chinese tree shrew)
Brite
KEGG Orthology (KO) [BR:
tup00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tup03037
]
102471915 (PKD2)
04040 Ion channels [BR:
tup04040
]
102471915 (PKD2)
Cilium and associated proteins [BR:
tup03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
102471915 (PKD2)
Ion channels [BR:
tup04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102471915 (PKD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
SU10_portal
Motif
Other DBs
NCBI-GeneID:
102471915
NCBI-ProteinID:
XP_014441308
LinkDB
All DBs
Position
Un
AA seq
763 aa
AA seq
DB search
MEDNSTNREKYLKSVLRELVTYLLFLVVLCILTYGMMSSSVYYYTRLMSQLFLDTPVSKT
ENTNFKTLSSMEDFWKFTEGSLLDGLYWKMEPSNQTEADNRSFIFYENLLLGVPRIRQLR
VRNGSCSIPQDLRDEIKECYDVYSVSSEDRAPFGPRNGTAWIYTSEKDLNGSSHWGVIAT
YSGAGYYLDLSRTREETAAQIASLKRNVWLDRGTRATFIDFSVYNANINLFCVVRLLVEF
PATGGVIPSWQFQPVKLIHYVTTFDFFLAACEIIFCFFILYYVVEEILEIRIHRLHYFRS
FWNCLDVVIIVLSVVAIGINIYRTSNVEVLMQFLEHQNTFPNFEHLAYWQIQFNNIAAVT
VFLVWIKLFKFINFNRTMSQLSTTLSRCAKDLFGFAIMFFIIFLAYAQLAYLVFGTQVDD
FSTFQECIFTQFRIILGDINFAEIEEANRILGPIYFTTFVFFMFFILLNMFLAIINDTYS
EVKSDMAQQKAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGGGKLNFDELRQDL
KGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEREREDLDLDHSSLPRPMSSRSF
PRSLDDSEEDDDEDSGHSSRRRGSISSGVSYEEFQVLVRRVDRMEHSIGSIVSKIDAVIV
KLEIMERAKLKRREVLGRLLDGVAEDERLGRDSEIHREQMERLVREELERWESDDAASQI
SHGLGTPVGPDGQPHPRSSRPSSSQSTEGMESGGGNGSSNIHV
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggaagataacagcactaaccgagagaaataccttaaaagtgtcttacgggaactggtc
acgtacctccttttcctcgtagtcttgtgcatcctgacctatggcatgatgagctccagc
gtgtactactatacccggctgatgtcacagctcttcctagacacccccgtgtccaaaacg
gagaacaccaactttaaaaccctctcttccatggaagacttctggaagttcacagaaggc
tctttactggacgggctgtattggaagatggagcccagcaaccaaactgaagccgacaac
cgaagtttcattttctatgagaatctgctgttaggggtcccccggatacggcagctcaga
gtcaggaatggctcctgctctatcccacaggacctgagagatgaaattaaagagtgctat
gatgtctactccgtcagtagtgaagacagggctccatttgggccacgaaatggaacagct
tggatctacacaagtgaaaaagacttgaacgggagtagccactggggagtaattgcaacc
tacagcggagctggctattacctggacttgtcgagaacaagagaggagacggctgcccag
attgctagcctcaagaggaatgtctggctggaccgaggaaccagggcaacgtttattgac
ttctcagtgtacaacgccaacattaacctgttctgcgtggtcaggttactggttgagttc
ccagcaacaggcggtgtgattccatcttggcaattccagcctgtgaagctgatccactat
gtcacaacttttgatttcttcctggccgcctgtgagataatcttttgtttctttatcctt
tactacgtggtggaagagatattggaaattcgcattcacagattacactatttcaggagt
ttctggaattgtctggatgttgtcatcatcgtgctatcagtggtagctataggaatcaac
atataccgaacttcaaatgtggaggtgctaatgcagtttctggagcatcaaaataccttt
cccaacttcgagcatctggcgtactggcaaatacagttcaacaatattgctgctgtcacg
gtatttttagtctggattaagctcttcaaattcatcaatttcaaccgcaccatgagccag
ctctccacgaccttatctcgctgcgccaaagacctctttggctttgccatcatgttcttc
attattttcttggcatatgctcagttggcataccttgtcttcggcacccaggtggatgac
ttcagtactttccaagagtgtatcttcactcaattccgtatcattttgggcgatatcaac
tttgcagagattgaggaagctaatcgaatcttgggaccaatttattttaccacctttgtg
ttctttatgttcttcatccttttgaatatgtttttggccatcatcaatgatacttattct
gaagtgaaatcagatatggcccagcagaaagctgaaatggaactctcagatcttatcaga
aagggctaccataaagcactggtcaaactaaaactgaagaaaaatactgtggatgacatt
tcagagagtctccggcaagggggaggcaaattaaactttgatgaacttcgacaagatctc
aaagggaagggccatactgatgcagagattgaggcaatattcacgaaatatgaccaagac
ggagaccaagaactgaccgagcacgaacatcagcagatgagagatgacttggagagagag
agggaggacctggacctggaccacagctccttaccacgtcccatgagcagccgaagcttc
ccacgaagcctggatgactccgaggaggatgatgatgaagacagtgggcacagctccaga
aggagggggagcatctccagcggggtttcttatgaagagtttcaagtcctggtgagaaga
gtggaccgaatggagcactccatcggcagcatcgtgtccaagattgacgctgtgatagtg
aagttggagatcatggaacgggccaagctgaagagaagggaggtgctggggaggctgctg
gatggagtggctgaggatgaaagactgggtcgtgacagtgagatccacagggagcagatg
gaacggctggtgagggaagagttggagcgctgggaatctgacgatgcagcttcccagatc
agtcacggcttaggcacgccagtgggaccggatggtcaacctcaccccagaagctcccgc
ccttcttcctcccagtctacagaaggcatggaaagtggaggtggaaatgggagttccaat
atccatgtgtaa
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